Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 AC104187.1-201ENST00000607510 612 ntBASIC21.44■■□□□ 1.02
CCDC66A2RUB6 MIR2861-201ENST00000636310 90 ntBASIC21.44■■□□□ 1.02
CCDC66A2RUB6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC66A2RUB6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CCDC66A2RUB6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCDC66A2RUB6 AL032819.2-201ENST00000624543 2162 ntBASIC21.43■■□□□ 1.02
CCDC66A2RUB6 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.43■■□□□ 1.02
CCDC66A2RUB6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC66A2RUB6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC66A2RUB6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC66A2RUB6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC66A2RUB6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC66A2RUB6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC66A2RUB6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC66A2RUB6 AC112907.3-201ENST00000577781 2400 ntBASIC21.43■■□□□ 1.02
CCDC66A2RUB6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC66A2RUB6 AC007613.1-201ENST00000572811 2597 ntBASIC21.43■■□□□ 1.02
CCDC66A2RUB6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC66A2RUB6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC66A2RUB6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC66A2RUB6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC66A2RUB6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC66A2RUB6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC66A2RUB6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC66A2RUB6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC66A2RUB6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC66A2RUB6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC66A2RUB6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC66A2RUB6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC66A2RUB6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 MIR935-201ENST00000401179 91 ntBASIC21.41■■□□□ 1.02
CCDC66A2RUB6 AC123595.1-201ENST00000440769 1046 ntBASIC21.41■■□□□ 1.02
CCDC66A2RUB6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 KRT18P20-201ENST00000548986 1279 ntBASIC21.41■■□□□ 1.02
CCDC66A2RUB6 SLC7A5P2-201ENST00000553010 536 ntBASIC21.41■■□□□ 1.02
CCDC66A2RUB6 AP001160.3-201ENST00000601484 763 ntBASIC21.41■■□□□ 1.02
CCDC66A2RUB6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC66A2RUB6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 CCDC92B-201ENST00000575506 885 ntBASIC21.4■■□□□ 1.02
CCDC66A2RUB6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC66A2RUB6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC66A2RUB6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.02
CCDC66A2RUB6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.39■■□□□ 1.02
CCDC66A2RUB6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
CCDC66A2RUB6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.39■■□□□ 1.02
CCDC66A2RUB6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CCDC66A2RUB6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.39■■□□□ 1.01
CCDC66A2RUB6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC66A2RUB6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC66A2RUB6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC66A2RUB6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCDC66A2RUB6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCDC66A2RUB6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC66A2RUB6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC66A2RUB6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC66A2RUB6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms