Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV25A0A0B4J276 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.96□□□□□ -0.02
TRAV25A0A0B4J276 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.96□□□□□ -0.02
TRAV25A0A0B4J276 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 SMG8-203ENST00000578922 2178 ntBASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 AC128676.1-201ENST00000454392 318 ntBASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 AC069544.1-201ENST00000609399 999 ntBASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV25A0A0B4J276 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 AL162377.1-201ENST00000618844 1793 ntBASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 TMEM191A-211ENST00000637163 1067 ntBASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 AC073648.6-201ENST00000641589 218 ntBASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV25A0A0B4J276 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
TRAV25A0A0B4J276 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 PHGDH-210ENST00000641115 1638 ntBASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV25A0A0B4J276 RN7SL471P-201ENST00000580476 299 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms