Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 AL031848.2-201ENST00000607670 837 ntBASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 ATP5G2P3-201ENST00000429083 425 ntBASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 AP005435.1-201ENST00000529293 1178 ntBASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-2A0A0B4J235 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 AC020916.1-201ENST00000587762 1774 ntBASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 AL691432.2-201ENST00000607222 2038 ntBASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 FXN-202ENST00000396364 980 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV13-2A0A0B4J235 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 AP004607.4-201ENST00000530158 1459 ntBASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms