Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.64■□□□□ 0.26
TRBV6-7A0A0A0MS04 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRBV6-7A0A0A0MS04 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRBV6-7A0A0A0MS04 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRBV6-7A0A0A0MS04 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
TRBV6-7A0A0A0MS04 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 AL138781.2-201ENST00000617896 1843 ntBASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 TREX1-205ENST00000625293 1783 ntBASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV6-7A0A0A0MS04 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 AL591742.1-201ENST00000604433 565 ntBASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TRBV6-7A0A0A0MS04 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 TERF1P5-201ENST00000477545 1207 ntBASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV6-7A0A0A0MS04 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 CYP21A1P-202ENST00000354927 1481 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms