Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHD7Q9P2D1 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHD7Q9P2D1 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHD7Q9P2D1 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.75□□□□□ -1.33
CHD7Q9P2D1 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHD7Q9P2D1 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHD7Q9P2D1 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC6.75□□□□□ -1.33
CHD7Q9P2D1 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.75□□□□□ -1.33
CHD7Q9P2D1 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.75□□□□□ -1.33
CHD7Q9P2D1 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.75□□□□□ -1.33
CHD7Q9P2D1 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.75□□□□□ -1.33
CHD7Q9P2D1 AC026951.2-201ENST00000613847 241 ntBASIC6.75□□□□□ -1.33
CHD7Q9P2D1 AC096708.4-201ENST00000620563 552 ntBASIC6.75□□□□□ -1.33
CHD7Q9P2D1 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.75□□□□□ -1.33
CHD7Q9P2D1 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.75□□□□□ -1.33
CHD7Q9P2D1 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
CHD7Q9P2D1 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 AC026464.2-201ENST00000567834 2421 ntBASIC6.74□□□□□ -1.33
CHD7Q9P2D1 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 CCSER1-209ENST00000509176 5847 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 AL663061.1-201ENST00000416625 580 ntBASIC6.74□□□□□ -1.33
CHD7Q9P2D1 AC022415.1-202ENST00000486612 523 ntBASIC6.74□□□□□ -1.33
CHD7Q9P2D1 AC093763.2-201ENST00000505334 1223 ntBASIC6.74□□□□□ -1.33
CHD7Q9P2D1 IGHV4-55-201ENST00000520889 368 ntBASIC6.74□□□□□ -1.33
CHD7Q9P2D1 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 ITIH6-201ENST00000218436 4968 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 CREM-208ENST00000361599 2170 ntTSL 5 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 RN7SL826P-201ENST00000479724 288 ntBASIC6.74□□□□□ -1.33
CHD7Q9P2D1 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 AL049840.5-201ENST00000602827 552 ntBASIC6.74□□□□□ -1.33
CHD7Q9P2D1 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 CLIP1-219ENST00000620786 5913 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
CHD7Q9P2D1 PHF8-204ENST00000357988 6024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 ENPEP-201ENST00000265162 6943 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 Z97989.1-201ENST00000531702 2421 ntBASIC6.73□□□□□ -1.33
CHD7Q9P2D1 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 MIR1269B-201ENST00000580405 75 ntBASIC6.73□□□□□ -1.33
CHD7Q9P2D1 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 AP001527.1-201ENST00000566440 1957 ntBASIC6.73□□□□□ -1.33
CHD7Q9P2D1 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 AC002553.3-201ENST00000453002 341 ntBASIC6.73□□□□□ -1.33
CHD7Q9P2D1 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 AC087575.1-201ENST00000585087 229 ntBASIC6.73□□□□□ -1.33
CHD7Q9P2D1 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 SLC25A16-207ENST00000609923 6529 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 SPTAN1-201ENST00000358161 7794 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CHD7Q9P2D1 AC015689.2-201ENST00000528172 1738 ntBASIC6.73□□□□□ -1.33
CHD7Q9P2D1 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 FABP12P1-201ENST00000401911 322 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 AL121835.1-201ENST00000404250 354 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 IGLV3-4-201ENST00000432300 244 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.72□□□□□ -1.33
CHD7Q9P2D1 RN7SL329P-201ENST00000467740 299 ntBASIC6.72□□□□□ -1.33
CHD7Q9P2D1 AP005119.1-201ENST00000580956 292 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms