RNA–Protein interactions for RNA: ENST00000453447.6

SPIRE1-206, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 5 BASIC

Gene SPIRE1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-206ENST00000453447 DNAJC5BQ9UF47 199 aa14.26□□□□□ -0.13
SPIRE1-206ENST00000453447 DNAJC5Q9H3Z4 198 aa14.13□□□□□ -0.15
SPIRE1-206ENST00000453447 ABCC9O60706 1549 aa13.92□□□□□ -0.18
SPIRE1-206ENST00000453447 NISCHQ9Y2I1 1504 aa13.52□□□□□ -0.24
SPIRE1-206ENST00000453447 TRIM41Q8WV44 630 aa12.82□□□□□ -0.36
SPIRE1-206ENST00000453447 CCDC180Q9P1Z9 1646 aa12.8□□□□□ -0.36
SPIRE1-206ENST00000453447 RB1CC1Q8TDY2 1594 aa12.77□□□□□ -0.36
SPIRE1-206ENST00000453447 CECR2Q9BXF3 1484 aa12.73□□□□□ -0.37
SPIRE1-206ENST00000453447 PABPN1Q86U42 306 aaKnown RBP eCLIP12.7□□□□□ -0.38
SPIRE1-206ENST00000453447 CUX2O14529 1486 aa12.68□□□□□ -0.38
SPIRE1-206ENST00000453447 CC2D2AQ9P2K1 1620 aa12.58□□□□□ -0.4
SPIRE1-206ENST00000453447 AEBP2Q6ZN18 517 aaPredicted RBP12.48□□□□□ -0.41
SPIRE1-206ENST00000453447 UNC13AQ9UPW8 1703 aa12.48□□□□□ -0.41
SPIRE1-206ENST00000453447 BICRAQ9NZM4 1560 aa12.45□□□□□ -0.42
SPIRE1-206ENST00000453447 NACADO15069 1562 aa12.39□□□□□ -0.43
SPIRE1-206ENST00000453447 ILDR1Q86SU0 546 aaPredicted RBP12.28□□□□□ -0.44
SPIRE1-206ENST00000453447 SHROOM4Q9ULL8 1493 aa12.26□□□□□ -0.45
SPIRE1-206ENST00000453447 EIF4G1Q04637 1599 aaKnown RBP12.24□□□□□ -0.45
SPIRE1-206ENST00000453447 ERCC6Q03468 1493 aa12.13□□□□□ -0.47
SPIRE1-206ENST00000453447 HRCP23327 699 aa12.05□□□□□ -0.48
SPIRE1-206ENST00000453447 PELP1Q8IZL8 1130 aaKnown RBP12.05□□□□□ -0.48
SPIRE1-206ENST00000453447 MYO15BQ96JP2 1530 aa11.84□□□□□ -0.51
SPIRE1-206ENST00000453447 THOC2Q8NI27 1593 aaKnown RBP11.83□□□□□ -0.52
SPIRE1-206ENST00000453447 RIMBP3CA6NJZ7 1639 aa11.82□□□□□ -0.52
SPIRE1-206ENST00000453447 RIMBP3BA6NNM3 1639 aa11.82□□□□□ -0.52
SPIRE1-206ENST00000453447 RIMBP3Q9UFD9 1639 aa11.82□□□□□ -0.52
SPIRE1-206ENST00000453447 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
SPIRE1-206ENST00000453447 OSCARQ8IYS5 282 aa11.78□□□□□ -0.52
SPIRE1-206ENST00000453447 BAZ1AQ9NRL2 1556 aaPredicted RBP11.76□□□□□ -0.53
SPIRE1-206ENST00000453447 DCAF8L2P0C7V8 631 aa11.75□□□□□ -0.53
SPIRE1-206ENST00000453447 MYT1Q01538 1121 aa11.72□□□□□ -0.53
SPIRE1-206ENST00000453447 ARHGEF11O15085 1522 aa11.63□□□□□ -0.55
SPIRE1-206ENST00000453447 SOCS7O14512 581 aa11.59□□□□□ -0.55
SPIRE1-206ENST00000453447 NESP48681 1621 aa11.59□□□□□ -0.55
SPIRE1-206ENST00000453447 LMTK3Q96Q04 1460 aa11.56□□□□□ -0.56
SPIRE1-206ENST00000453447 DCAF1Q9Y4B6 1507 aa11.56□□□□□ -0.56
SPIRE1-206ENST00000453447 PPARGC1BQ86YN6 1023 aaKnown RBP11.54□□□□□ -0.56
SPIRE1-206ENST00000453447 PCGF6Q9BYE7 350 aa11.53□□□□□ -0.56
SPIRE1-206ENST00000453447 SCRIBQ14160 1630 aa11.53□□□□□ -0.56
SPIRE1-206ENST00000453447 CYB5RLQ6IPT4 315 aa11.53□□□□□ -0.56
SPIRE1-206ENST00000453447 SMARCA2P51531 1590 aa11.52□□□□□ -0.57
SPIRE1-206ENST00000453447 CHIC1Q5VXU3 224 aa11.5□□□□□ -0.57
SPIRE1-206ENST00000453447 FBXO41Q8TF61 875 aa11.47□□□□□ -0.57
SPIRE1-206ENST00000453447 KIF21AQ7Z4S6 1674 aa11.45□□□□□ -0.58
SPIRE1-206ENST00000453447 NCAPD3P42695 1498 aa11.44□□□□□ -0.58
SPIRE1-206ENST00000453447 ARAP1Q96P48 1450 aa11.43□□□□□ -0.58
SPIRE1-206ENST00000453447 ERCC6L2Q5T890 1561 aa11.42□□□□□ -0.58
SPIRE1-206ENST00000453447 SCAF1Q9H7N4 1312 aaKnown RBP11.4□□□□□ -0.58
SPIRE1-206ENST00000453447 LAMC3Q9Y6N6 1575 aa11.39□□□□□ -0.59
SPIRE1-206ENST00000453447 ZCCHC6Q5VYS8 1495 aaKnown RBP11.39□□□□□ -0.59
SPIRE1-206ENST00000453447 TTBK1Q5TCY1 1321 aaPredicted RBP11.38□□□□□ -0.59
SPIRE1-206ENST00000453447 WDR62O43379 1518 aa11.37□□□□□ -0.59
SPIRE1-206ENST00000453447 ZEB1P37275 1124 aaPredicted RBP11.37□□□□□ -0.59
SPIRE1-206ENST00000453447 ILDR2Q71H61 639 aa11.35□□□□□ -0.59
SPIRE1-206ENST00000453447 SUPT5HO00267 1087 aaKnown RBP11.35□□□□□ -0.59
SPIRE1-206ENST00000453447 PDS5BQ9NTI5 1447 aa11.34□□□□□ -0.59
SPIRE1-206ENST00000453447 MRC2Q9UBG0 1479 aa11.33□□□□□ -0.6
SPIRE1-206ENST00000453447 KDM4FA0A1W2PPD8 638 aa11.3□□□□□ -0.6
SPIRE1-206ENST00000453447 TRIM26Q12899 539 aaPredicted RBP11.29□□□□□ -0.6
SPIRE1-206ENST00000453447 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
SPIRE1-206ENST00000453447 RSF1Q96T23 1441 aaPredicted RBP11.2□□□□□ -0.62
SPIRE1-206ENST00000453447 HECW2Q9P2P5 1572 aa11.2□□□□□ -0.62
SPIRE1-206ENST00000453447 ATAD2BQ9ULI0 1458 aa11.18□□□□□ -0.62
SPIRE1-206ENST00000453447 DISP3Q9P2K9 1392 aa11.17□□□□□ -0.62
SPIRE1-206ENST00000453447 ACIN1Q9UKV3 1341 aaKnown RBP11.14□□□□□ -0.63
SPIRE1-206ENST00000453447 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
SPIRE1-206ENST00000453447 SYNJ2O15056 1496 aa11.04□□□□□ -0.64
SPIRE1-206ENST00000453447 CENPBP07199 599 aaPredicted RBP11.01□□□□□ -0.65
SPIRE1-206ENST00000453447 NEUROD1Q13562 356 aa11□□□□□ -0.65
SPIRE1-206ENST00000453447 CEP164Q9UPV0 1460 aa10.99□□□□□ -0.65
SPIRE1-206ENST00000453447 CHD1O14646 1710 aa10.99□□□□□ -0.65
SPIRE1-206ENST00000453447 LOC105371045A0A1W2PR82 267 aa10.99□□□□□ -0.65
SPIRE1-206ENST00000453447 CADPSQ9ULU8 1353 aa10.98□□□□□ -0.65
SPIRE1-206ENST00000453447 SPATA31D1Q6ZQQ2 1576 aa10.98□□□□□ -0.65
SPIRE1-206ENST00000453447 BAZ1BQ9UIG0 1483 aaKnown RBP10.97□□□□□ -0.65
SPIRE1-206ENST00000453447 GTF3C3Q9Y5Q9 886 aa10.96□□□□□ -0.66
SPIRE1-206ENST00000453447 KIF13AQ9H1H9 1805 aa10.95□□□□□ -0.66
SPIRE1-206ENST00000453447 SMARCA4P51532 1647 aa10.94□□□□□ -0.66
SPIRE1-206ENST00000453447 ADGRL1O94910 1474 aa10.91□□□□□ -0.66
SPIRE1-206ENST00000453447 ZNF608Q9ULD9 1512 aaPredicted RBP10.9□□□□□ -0.66
SPIRE1-206ENST00000453447 PRKCSHP14314 528 aaPredicted RBP10.89□□□□□ -0.67
SPIRE1-206ENST00000453447 CLASP1Q7Z460 1538 aa10.88□□□□□ -0.67
SPIRE1-206ENST00000453447 URB2Q14146 1524 aaKnown RBP10.86□□□□□ -0.67
SPIRE1-206ENST00000453447 ERICH6Q7L0X2 663 aa10.85□□□□□ -0.67
SPIRE1-206ENST00000453447 KDM6BO15054 1643 aa10.85□□□□□ -0.67
SPIRE1-206ENST00000453447 IFT140Q96RY7 1462 aa10.85□□□□□ -0.67
SPIRE1-206ENST00000453447 FANCD2Q9BXW9 1451 aa10.85□□□□□ -0.67
SPIRE1-206ENST00000453447 GAPVD1Q14C86 1478 aa10.82□□□□□ -0.68
SPIRE1-206ENST00000453447 EIF4G3O43432 1585 aaKnown RBP10.81□□□□□ -0.68
SPIRE1-206ENST00000453447 PEG3Q9GZU2 1588 aa10.81□□□□□ -0.68
SPIRE1-206ENST00000453447 APLP2Q06481 763 aa10.8□□□□□ -0.68
SPIRE1-206ENST00000453447 DIEXFQ68CQ4 756 aaKnown RBP10.8□□□□□ -0.68
SPIRE1-206ENST00000453447 SYNJ1O43426 1573 aa10.72□□□□□ -0.69
SPIRE1-206ENST00000453447 FBLN2P98095 1184 aa10.72□□□□□ -0.69
SPIRE1-206ENST00000453447 CLSPNQ9HAW4 1339 aa10.72□□□□□ -0.69
SPIRE1-206ENST00000453447 ABCC10Q5T3U5 1492 aa10.69□□□□□ -0.7
SPIRE1-206ENST00000453447 CERKQ8TCT0 537 aa10.68□□□□□ -0.7
SPIRE1-206ENST00000453447 CCER1Q8TC90 406 aaPredicted RBP10.67□□□□□ -0.7
SPIRE1-206ENST00000453447 BCL11AQ9H165 835 aa10.66□□□□□ -0.7
SPIRE1-206ENST00000453447 FAM69CQ0P6D2 419 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms