RNA–Protein interactions for RNA: ENST00000449023.1

SRGAP3-AS4-201, SRGAP3 antisense RNA 4, humanhuman

TSL 2 BASIC

Gene SRGAP3-AS4, Length 377 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-AS4-201ENST00000449023 AEBP2Q6ZN18 517 aaPredicted RBP24.48■■□□□ 1.51
SRGAP3-AS4-201ENST00000449023 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
SRGAP3-AS4-201ENST00000449023 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
SRGAP3-AS4-201ENST00000449023 PHF23Q9BUL5 403 aaPredicted RBP20.68■□□□□ 0.9
SRGAP3-AS4-201ENST00000449023 FOXD1Q16676 465 aa19.49■□□□□ 0.71
SRGAP3-AS4-201ENST00000449023 PLPPR3Q6T4P5 718 aa18.96■□□□□ 0.63
SRGAP3-AS4-201ENST00000449023 MSH5O43196 834 aa18.35■□□□□ 0.53
SRGAP3-AS4-201ENST00000449023 PIAS4Q8N2W9 510 aaPredicted RBP18.28■□□□□ 0.52
SRGAP3-AS4-201ENST00000449023 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
SRGAP3-AS4-201ENST00000449023 ADRA2BP18089 450 aa18.27■□□□□ 0.52
SRGAP3-AS4-201ENST00000449023 POTEDQ86YR6 584 aa17.75■□□□□ 0.43
SRGAP3-AS4-201ENST00000449023 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
SRGAP3-AS4-201ENST00000449023 MAPK8IP2Q13387 824 aaPredicted RBP16.66■□□□□ 0.26
SRGAP3-AS4-201ENST00000449023 PPP4R3CPQ6ZMV5 832 aa16.64■□□□□ 0.25
SRGAP3-AS4-201ENST00000449023 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
SRGAP3-AS4-201ENST00000449023 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
SRGAP3-AS4-201ENST00000449023 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
SRGAP3-AS4-201ENST00000449023 HOXD11P31277 338 aaPredicted RBP16.05■□□□□ 0.16
SRGAP3-AS4-201ENST00000449023 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
SRGAP3-AS4-201ENST00000449023 DCAF8L1A6NGE4 600 aa15.96■□□□□ 0.15
SRGAP3-AS4-201ENST00000449023 NPM3O75607 178 aaKnown RBP15.85■□□□□ 0.13
SRGAP3-AS4-201ENST00000449023 KCNA4P22459 653 aa15.83■□□□□ 0.12
SRGAP3-AS4-201ENST00000449023 CACNB1Q02641 598 aaPredicted RBP15.68■□□□□ 0.1
SRGAP3-AS4-201ENST00000449023 RNF39Q9H2S5 420 aa15.59■□□□□ 0.09
SRGAP3-AS4-201ENST00000449023 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
SRGAP3-AS4-201ENST00000449023 C1QBPQ07021 282 aaKnown RBP15.43■□□□□ 0.06
SRGAP3-AS4-201ENST00000449023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
SRGAP3-AS4-201ENST00000449023 SLC4A1APQ9BWU0 796 aaKnown RBP15.04■□□□□ -0
SRGAP3-AS4-201ENST00000449023 SLC4A2P04920 1241 aa15.03■□□□□ -0
SRGAP3-AS4-201ENST00000449023 U3KPZ7 1027 aaPredicted RBP15.01□□□□□ -0.01
SRGAP3-AS4-201ENST00000449023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.77□□□□□ -0.05
SRGAP3-AS4-201ENST00000449023 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.05
SRGAP3-AS4-201ENST00000449023 CAPN15O75808 1086 aa14.72□□□□□ -0.05
SRGAP3-AS4-201ENST00000449023 APLP2Q06481 763 aa14.72□□□□□ -0.05
SRGAP3-AS4-201ENST00000449023 FOXD4L1Q9NU39 408 aa14.71□□□□□ -0.05
SRGAP3-AS4-201ENST00000449023 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
SRGAP3-AS4-201ENST00000449023 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
SRGAP3-AS4-201ENST00000449023 SPINK5Q9NQ38 1064 aaPredicted RBP14.68□□□□□ -0.06
SRGAP3-AS4-201ENST00000449023 DSG3P32926 999 aa14.6□□□□□ -0.07
SRGAP3-AS4-201ENST00000449023 ZBTB22O15209 634 aa14.53□□□□□ -0.08
SRGAP3-AS4-201ENST00000449023 ZNF219Q9P2Y4 722 aaPredicted RBP14.53□□□□□ -0.08
SRGAP3-AS4-201ENST00000449023 TRHP20396 242 aaPredicted RBP14.52□□□□□ -0.09
SRGAP3-AS4-201ENST00000449023 ABCB7O75027 752 aa14.35□□□□□ -0.11
SRGAP3-AS4-201ENST00000449023 ATF5Q9Y2D1 282 aaPredicted RBP14.26□□□□□ -0.13
SRGAP3-AS4-201ENST00000449023 ATXN8OSP0DMR3 200 aa14.23□□□□□ -0.13
SRGAP3-AS4-201ENST00000449023 NISCHQ9Y2I1 1504 aa14.21□□□□□ -0.13
SRGAP3-AS4-201ENST00000449023 POLA2Q14181 598 aa14.2□□□□□ -0.14
SRGAP3-AS4-201ENST00000449023 EHMT2Q96KQ7 1210 aa14.2□□□□□ -0.14
SRGAP3-AS4-201ENST00000449023 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
SRGAP3-AS4-201ENST00000449023 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
SRGAP3-AS4-201ENST00000449023 ZBTB12Q9Y330 459 aaPredicted RBP14□□□□□ -0.17
SRGAP3-AS4-201ENST00000449023 POTEHQ6S545 545 aa13.95□□□□□ -0.18
SRGAP3-AS4-201ENST00000449023 FBLN2P98095 1184 aa13.77□□□□□ -0.21
SRGAP3-AS4-201ENST00000449023 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
SRGAP3-AS4-201ENST00000449023 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
SRGAP3-AS4-201ENST00000449023 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
SRGAP3-AS4-201ENST00000449023 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
SRGAP3-AS4-201ENST00000449023 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
SRGAP3-AS4-201ENST00000449023 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
SRGAP3-AS4-201ENST00000449023 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
SRGAP3-AS4-201ENST00000449023 REM2Q8IYK8 340 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-AS4-201ENST00000449023 ZNF692Q9BU19 519 aaPredicted RBP13.44□□□□□ -0.26
SRGAP3-AS4-201ENST00000449023 SSUH2Q9Y2M2 353 aa13.38□□□□□ -0.27
SRGAP3-AS4-201ENST00000449023 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
SRGAP3-AS4-201ENST00000449023 PIP4P2Q8N4L2 257 aa13.3□□□□□ -0.28
SRGAP3-AS4-201ENST00000449023 PABPN1Q86U42 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
SRGAP3-AS4-201ENST00000449023 SPDYE1Q8NFV5 336 aaPredicted RBP13.24□□□□□ -0.29
SRGAP3-AS4-201ENST00000449023 FXR2P51116 673 aaKnown RBP eCLIP13.23□□□□□ -0.29
SRGAP3-AS4-201ENST00000449023 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
SRGAP3-AS4-201ENST00000449023 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
SRGAP3-AS4-201ENST00000449023 SP7Q8TDD2 431 aaPredicted RBP13.11□□□□□ -0.31
SRGAP3-AS4-201ENST00000449023 HAX1O00165 279 aa13.08□□□□□ -0.32
SRGAP3-AS4-201ENST00000449023 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
SRGAP3-AS4-201ENST00000449023 PRKAR2AP13861 404 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-AS4-201ENST00000449023 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
SRGAP3-AS4-201ENST00000449023 PROM2Q8N271 834 aa12.89□□□□□ -0.35
SRGAP3-AS4-201ENST00000449023 FKBP8Q14318 412 aa12.87□□□□□ -0.35
SRGAP3-AS4-201ENST00000449023 CHADLQ6NUI6 762 aa12.87□□□□□ -0.35
SRGAP3-AS4-201ENST00000449023 C19orf67A6NJJ6 358 aa12.81□□□□□ -0.36
SRGAP3-AS4-201ENST00000449023 EVX2Q03828 476 aa12.8□□□□□ -0.36
SRGAP3-AS4-201ENST00000449023 ABCC9O60706 1549 aa12.77□□□□□ -0.37
SRGAP3-AS4-201ENST00000449023 CREBZFQ9NS37 354 aa12.74□□□□□ -0.37
SRGAP3-AS4-201ENST00000449023 FARP1Q9Y4F1 1045 aaPredicted RBP12.74□□□□□ -0.37
SRGAP3-AS4-201ENST00000449023 CCDC180Q9P1Z9 1646 aa12.68□□□□□ -0.38
SRGAP3-AS4-201ENST00000449023 CD44P16070 742 aaKnown RBP12.62□□□□□ -0.39
SRGAP3-AS4-201ENST00000449023 GABBR2O75899 941 aa12.6□□□□□ -0.39
SRGAP3-AS4-201ENST00000449023 PLEKHG5O94827 1062 aa12.59□□□□□ -0.39
SRGAP3-AS4-201ENST00000449023 NPM1P06748 294 aaKnown RBP eCLIP12.58□□□□□ -0.4
SRGAP3-AS4-201ENST00000449023 CLCN6P51797 869 aa12.57□□□□□ -0.4
SRGAP3-AS4-201ENST00000449023 MIER1Q8N108 512 aa12.57□□□□□ -0.4
SRGAP3-AS4-201ENST00000449023 FBXO3Q9UK99 471 aa12.56□□□□□ -0.4
SRGAP3-AS4-201ENST00000449023 MNX1P50219 401 aaPredicted RBP12.55□□□□□ -0.4
SRGAP3-AS4-201ENST00000449023 PLCD3Q8N3E9 789 aa12.53□□□□□ -0.4
SRGAP3-AS4-201ENST00000449023 PAK3O75914 559 aaPredicted RBP12.49□□□□□ -0.41
SRGAP3-AS4-201ENST00000449023 ZRANB1Q9UGI0 708 aa12.47□□□□□ -0.41
SRGAP3-AS4-201ENST00000449023 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-AS4-201ENST00000449023 ZBTB47Q9UFB7 747 aaPredicted RBP12.44□□□□□ -0.42
SRGAP3-AS4-201ENST00000449023 VASPP50552 380 aaPredicted RBP12.36□□□□□ -0.43
SRGAP3-AS4-201ENST00000449023 DCBLD2Q96PD2 775 aa12.34□□□□□ -0.43
SRGAP3-AS4-201ENST00000449023 TSPYL2Q9H2G4 693 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms