RNA–Protein interactions for RNA: ENST00000515849.2

CTNNA1P1-201, Transcript of catenin alpha 1 pseudogene 1, humanhuman

BASIC

Gene CTNNA1P1, Length 2,728 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P1-201ENST00000515849 NISCHQ9Y2I1 1504 aa14.06□□□□□ -0.16
CTNNA1P1-201ENST00000515849 SHROOM4Q9ULL8 1493 aa12.29□□□□□ -0.44
CTNNA1P1-201ENST00000515849 SUPT5HO00267 1087 aaKnown RBP12□□□□□ -0.49
CTNNA1P1-201ENST00000515849 DCAF8L2P0C7V8 631 aa11.97□□□□□ -0.49
CTNNA1P1-201ENST00000515849 ZCCHC6Q5VYS8 1495 aaKnown RBP11.87□□□□□ -0.51
CTNNA1P1-201ENST00000515849 CCDC180Q9P1Z9 1646 aa11.81□□□□□ -0.52
CTNNA1P1-201ENST00000515849 MYO15BQ96JP2 1530 aa11.56□□□□□ -0.56
CTNNA1P1-201ENST00000515849 CHIC1Q5VXU3 224 aa11.54□□□□□ -0.56
CTNNA1P1-201ENST00000515849 DCAF1Q9Y4B6 1507 aa11.38□□□□□ -0.59
CTNNA1P1-201ENST00000515849 HRCP23327 699 aa11.36□□□□□ -0.59
CTNNA1P1-201ENST00000515849 LOC105371045A0A1W2PR82 267 aa11.33□□□□□ -0.6
CTNNA1P1-201ENST00000515849 SCRIBQ14160 1630 aa11.33□□□□□ -0.6
CTNNA1P1-201ENST00000515849 ABCC9O60706 1549 aa11.27□□□□□ -0.6
CTNNA1P1-201ENST00000515849 PCGF6Q9BYE7 350 aa11.25□□□□□ -0.61
CTNNA1P1-201ENST00000515849 EHMT2Q96KQ7 1210 aa11.19□□□□□ -0.62
CTNNA1P1-201ENST00000515849 RSF1Q96T23 1441 aaPredicted RBP11.19□□□□□ -0.62
CTNNA1P1-201ENST00000515849 FAM9AQ8IZU1 332 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1P1-201ENST00000515849 CECR2Q9BXF3 1484 aa11.11□□□□□ -0.63
CTNNA1P1-201ENST00000515849 PPARGC1BQ86YN6 1023 aaKnown RBP11.11□□□□□ -0.63
CTNNA1P1-201ENST00000515849 RB1CC1Q8TDY2 1594 aa11.1□□□□□ -0.63
CTNNA1P1-201ENST00000515849 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
CTNNA1P1-201ENST00000515849 MROH2BQ7Z745 1585 aa11.02□□□□□ -0.65
CTNNA1P1-201ENST00000515849 NACADO15069 1562 aa10.97□□□□□ -0.65
CTNNA1P1-201ENST00000515849 PELP1Q8IZL8 1130 aaKnown RBP10.97□□□□□ -0.65
CTNNA1P1-201ENST00000515849 WIZO95785 1651 aa10.96□□□□□ -0.66
CTNNA1P1-201ENST00000515849 TRIM26Q12899 539 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1P1-201ENST00000515849 PABPN1Q86U42 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
CTNNA1P1-201ENST00000515849 TTBK1Q5TCY1 1321 aaPredicted RBP10.79□□□□□ -0.68
CTNNA1P1-201ENST00000515849 ABCC8Q09428 1581 aa10.77□□□□□ -0.69
CTNNA1P1-201ENST00000515849 BAZ1AQ9NRL2 1556 aaPredicted RBP10.77□□□□□ -0.69
CTNNA1P1-201ENST00000515849 ZEB1P37275 1124 aaPredicted RBP10.76□□□□□ -0.69
CTNNA1P1-201ENST00000515849 UNC13AQ9UPW8 1703 aa10.73□□□□□ -0.69
CTNNA1P1-201ENST00000515849 CCDC88BA6NC98 1476 aa10.73□□□□□ -0.69
CTNNA1P1-201ENST00000515849 SMARCA4P51532 1647 aa10.71□□□□□ -0.7
CTNNA1P1-201ENST00000515849 EIF4G1Q04637 1599 aaKnown RBP10.71□□□□□ -0.7
CTNNA1P1-201ENST00000515849 TOP2AP11388 1531 aaKnown RBP10.68□□□□□ -0.7
CTNNA1P1-201ENST00000515849 SOGA1O94964 1423 aa10.67□□□□□ -0.7
CTNNA1P1-201ENST00000515849 SMARCA2P51531 1590 aa10.66□□□□□ -0.7
CTNNA1P1-201ENST00000515849 MYT1Q01538 1121 aa10.65□□□□□ -0.7
CTNNA1P1-201ENST00000515849 RUSC2Q8N2Y8 1516 aa10.65□□□□□ -0.7
CTNNA1P1-201ENST00000515849 BICRAQ9NZM4 1560 aa10.63□□□□□ -0.71
CTNNA1P1-201ENST00000515849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.63□□□□□ -0.71
CTNNA1P1-201ENST00000515849 SCAF1Q9H7N4 1312 aaKnown RBP10.6□□□□□ -0.71
CTNNA1P1-201ENST00000515849 UBTFP17480 764 aaKnown RBP10.57□□□□□ -0.72
CTNNA1P1-201ENST00000515849 RANGAP1P46060 587 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1P1-201ENST00000515849 CEP162Q5TB80 1403 aa10.54□□□□□ -0.72
CTNNA1P1-201ENST00000515849 CSRNP3Q8WYN3 585 aa10.53□□□□□ -0.72
CTNNA1P1-201ENST00000515849 CCER1Q8TC90 406 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1P1-201ENST00000515849 WRNQ14191 1432 aaPredicted RBP eCLIP10.49□□□□□ -0.73
CTNNA1P1-201ENST00000515849 ATAD2BQ9ULI0 1458 aa10.47□□□□□ -0.73
CTNNA1P1-201ENST00000515849 SYNJ1O43426 1573 aa10.47□□□□□ -0.73
CTNNA1P1-201ENST00000515849 TNIKQ9UKE5 1360 aa10.45□□□□□ -0.74
CTNNA1P1-201ENST00000515849 BAZ1BQ9UIG0 1483 aaKnown RBP10.45□□□□□ -0.74
CTNNA1P1-201ENST00000515849 ACIN1Q9UKV3 1341 aaKnown RBP10.4□□□□□ -0.74
CTNNA1P1-201ENST00000515849 PEG3Q9GZU2 1588 aa10.4□□□□□ -0.74
CTNNA1P1-201ENST00000515849 GOLGA3Q08378 1498 aa10.4□□□□□ -0.74
CTNNA1P1-201ENST00000515849 HNRNPUL2Q1KMD3 747 aaKnown RBP10.4□□□□□ -0.75
CTNNA1P1-201ENST00000515849 NEUROD1Q13562 356 aa10.37□□□□□ -0.75
CTNNA1P1-201ENST00000515849 RAPGEF2Q9Y4G8 1499 aa10.37□□□□□ -0.75
CTNNA1P1-201ENST00000515849 EEA1Q15075 1411 aa10.36□□□□□ -0.75
CTNNA1P1-201ENST00000515849 CLIP1P30622 1438 aa10.34□□□□□ -0.75
CTNNA1P1-201ENST00000515849 DIEXFQ68CQ4 756 aaKnown RBP10.33□□□□□ -0.76
CTNNA1P1-201ENST00000515849 CEP164Q9UPV0 1460 aa10.32□□□□□ -0.76
CTNNA1P1-201ENST00000515849 KIF21BO75037 1637 aa10.27□□□□□ -0.77
CTNNA1P1-201ENST00000515849 GTF3C3Q9Y5Q9 886 aa10.27□□□□□ -0.77
CTNNA1P1-201ENST00000515849 CENPBP07199 599 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1P1-201ENST00000515849 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
CTNNA1P1-201ENST00000515849 VPS8Q8N3P4 1428 aa10.24□□□□□ -0.77
CTNNA1P1-201ENST00000515849 CUX1P39880 1505 aa10.24□□□□□ -0.77
CTNNA1P1-201ENST00000515849 APLP2Q06481 763 aa10.24□□□□□ -0.77
CTNNA1P1-201ENST00000515849 KANK4Q5T7N3 995 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1P1-201ENST00000515849 ZNF316A6NFI3 1004 aaPredicted RBP10.21□□□□□ -0.78
CTNNA1P1-201ENST00000515849 NCAPD3P42695 1498 aa10.21□□□□□ -0.78
CTNNA1P1-201ENST00000515849 ITGAEP38570 1179 aa10.18□□□□□ -0.78
CTNNA1P1-201ENST00000515849 ARAP1Q96P48 1450 aa10.18□□□□□ -0.78
CTNNA1P1-201ENST00000515849 YTHDC1Q96MU7 727 aaKnown RBP10.18□□□□□ -0.78
CTNNA1P1-201ENST00000515849 BIVM-ERCC5R4GMW8 1640 aa10.17□□□□□ -0.78
CTNNA1P1-201ENST00000515849 PRXQ9BXM0 1461 aa10.17□□□□□ -0.78
CTNNA1P1-201ENST00000515849 HMGXB3Q12766 1538 aa10.16□□□□□ -0.78
CTNNA1P1-201ENST00000515849 CFTRP13569 1480 aa10.15□□□□□ -0.78
CTNNA1P1-201ENST00000515849 P3H3Q8IVL6 736 aa10.14□□□□□ -0.79
CTNNA1P1-201ENST00000515849 KIF27Q86VH2 1401 aa10.14□□□□□ -0.79
CTNNA1P1-201ENST00000515849 CUX2O14529 1486 aa10.12□□□□□ -0.79
CTNNA1P1-201ENST00000515849 MIER1Q8N108 512 aa10.11□□□□□ -0.79
CTNNA1P1-201ENST00000515849 ATP1B4Q9UN42 357 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1P1-201ENST00000515849 ARHGAP35Q9NRY4 1499 aa10.09□□□□□ -0.79
CTNNA1P1-201ENST00000515849 ERICH3Q5RHP9 1530 aa10.08□□□□□ -0.8
CTNNA1P1-201ENST00000515849 DNAJC5BQ9UF47 199 aa10.08□□□□□ -0.8
CTNNA1P1-201ENST00000515849 IGF1RP08069 1367 aa10.08□□□□□ -0.8
CTNNA1P1-201ENST00000515849 CADPSQ9ULU8 1353 aa10.07□□□□□ -0.8
CTNNA1P1-201ENST00000515849 FGD5Q6ZNL6 1462 aa10.06□□□□□ -0.8
CTNNA1P1-201ENST00000515849 NESP48681 1621 aa10.06□□□□□ -0.8
CTNNA1P1-201ENST00000515849 DHX57Q6P158 1386 aaKnown RBP10.05□□□□□ -0.8
CTNNA1P1-201ENST00000515849 CC2D2AQ9P2K1 1620 aa10.04□□□□□ -0.8
CTNNA1P1-201ENST00000515849 RAD54L2Q9Y4B4 1467 aa10.04□□□□□ -0.8
CTNNA1P1-201ENST00000515849 BCL11AQ9H165 835 aa10.03□□□□□ -0.8
CTNNA1P1-201ENST00000515849 CARMIL1Q5VZK9 1371 aa10.03□□□□□ -0.8
CTNNA1P1-201ENST00000515849 PRKCSHP14314 528 aaPredicted RBP10.02□□□□□ -0.81
CTNNA1P1-201ENST00000515849 CLSPNQ9HAW4 1339 aa10□□□□□ -0.81
CTNNA1P1-201ENST00000515849 FANCD2Q9BXW9 1451 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms