RNA–Protein interactions for RNA: ENST00000566440.1

AP001527.1-201, humanhuman

BASIC

Gene AP001527.1, Length 1,957 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001527.1-201ENST00000566440 SLC24A1O60721 1099 aa18.02■□□□□ 0.47
AP001527.1-201ENST00000566440 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
AP001527.1-201ENST00000566440 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.24
AP001527.1-201ENST00000566440 DAXXQ9UER7 740 aaPredicted RBP16.43■□□□□ 0.22
AP001527.1-201ENST00000566440 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
AP001527.1-201ENST00000566440 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
AP001527.1-201ENST00000566440 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
AP001527.1-201ENST00000566440 TTBK1Q5TCY1 1321 aaPredicted RBP16■□□□□ 0.15
AP001527.1-201ENST00000566440 MYT1Q01538 1121 aa15.98■□□□□ 0.15
AP001527.1-201ENST00000566440 NISCHQ9Y2I1 1504 aa15.86■□□□□ 0.13
AP001527.1-201ENST00000566440 PELP1Q8IZL8 1130 aaKnown RBP15.76■□□□□ 0.11
AP001527.1-201ENST00000566440 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
AP001527.1-201ENST00000566440 APLP2Q06481 763 aa15.74■□□□□ 0.11
AP001527.1-201ENST00000566440 PRKCSHP14314 528 aaPredicted RBP15.63■□□□□ 0.09
AP001527.1-201ENST00000566440 ERICH6Q7L0X2 663 aa15.61■□□□□ 0.09
AP001527.1-201ENST00000566440 AEBP2Q6ZN18 517 aaPredicted RBP15.6■□□□□ 0.09
AP001527.1-201ENST00000566440 ARXQ96QS3 562 aa15.47■□□□□ 0.07
AP001527.1-201ENST00000566440 KCNA4P22459 653 aa15.44■□□□□ 0.06
AP001527.1-201ENST00000566440 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
AP001527.1-201ENST00000566440 TIMELESSQ9UNS1 1208 aa15.25■□□□□ 0.03
AP001527.1-201ENST00000566440 RANGAP1P46060 587 aaPredicted RBP15.11■□□□□ 0.01
AP001527.1-201ENST00000566440 TULP1O00294 542 aaPredicted RBP15□□□□□ -0.01
AP001527.1-201ENST00000566440 TAOK2Q9UL54 1235 aa14.98□□□□□ -0.01
AP001527.1-201ENST00000566440 PHF23Q9BUL5 403 aaPredicted RBP14.98□□□□□ -0.01
AP001527.1-201ENST00000566440 HOMEZQ8IX15 550 aa14.96□□□□□ -0.01
AP001527.1-201ENST00000566440 BCANQ96GW7 911 aa14.8□□□□□ -0.04
AP001527.1-201ENST00000566440 EIF5BO60841 1220 aaKnown RBP14.79□□□□□ -0.04
AP001527.1-201ENST00000566440 KLHL34Q8N239 644 aa14.75□□□□□ -0.05
AP001527.1-201ENST00000566440 TPRNQ4KMQ1 711 aa14.73□□□□□ -0.05
AP001527.1-201ENST00000566440 PODXL2Q9NZ53 605 aa14.66□□□□□ -0.06
AP001527.1-201ENST00000566440 GTF3C3Q9Y5Q9 886 aa14.54□□□□□ -0.08
AP001527.1-201ENST00000566440 PLCB2Q00722 1185 aa14.47□□□□□ -0.09
AP001527.1-201ENST00000566440 SLC4A1APQ9BWU0 796 aaKnown RBP14.47□□□□□ -0.09
AP001527.1-201ENST00000566440 NPM2Q86SE8 214 aaKnown RBP14.36□□□□□ -0.11
AP001527.1-201ENST00000566440 HAP1P54257 671 aaPredicted RBP14.34□□□□□ -0.11
AP001527.1-201ENST00000566440 PLEKHG5O94827 1062 aa14.22□□□□□ -0.13
AP001527.1-201ENST00000566440 TMEM132AQ24JP5 1023 aa14.2□□□□□ -0.14
AP001527.1-201ENST00000566440 C14orf37Q86TY3 774 aa14.18□□□□□ -0.14
AP001527.1-201ENST00000566440 FBXO3Q9UK99 471 aa14.15□□□□□ -0.14
AP001527.1-201ENST00000566440 VSIG10Q8N0Z9 540 aa14□□□□□ -0.17
AP001527.1-201ENST00000566440 TRIM26Q12899 539 aaPredicted RBP13.99□□□□□ -0.17
AP001527.1-201ENST00000566440 ZBTB22O15209 634 aa13.89□□□□□ -0.19
AP001527.1-201ENST00000566440 BCL11AQ9H165 835 aa13.87□□□□□ -0.19
AP001527.1-201ENST00000566440 LOC105371045A0A1W2PR82 267 aa13.85□□□□□ -0.19
AP001527.1-201ENST00000566440 SUPT5HO00267 1087 aaKnown RBP13.85□□□□□ -0.19
AP001527.1-201ENST00000566440 DCAF8L2P0C7V8 631 aa13.84□□□□□ -0.19
AP001527.1-201ENST00000566440 KDM2AQ9Y2K7 1162 aa13.8□□□□□ -0.2
AP001527.1-201ENST00000566440 HRCP23327 699 aa13.78□□□□□ -0.2
AP001527.1-201ENST00000566440 UBTFP17480 764 aaKnown RBP13.76□□□□□ -0.21
AP001527.1-201ENST00000566440 POTEDQ86YR6 584 aa13.74□□□□□ -0.21
AP001527.1-201ENST00000566440 PDIA4P13667 645 aaKnown RBP13.71□□□□□ -0.22
AP001527.1-201ENST00000566440 FKBP8Q14318 412 aa13.71□□□□□ -0.22
AP001527.1-201ENST00000566440 FBLN2P98095 1184 aa13.67□□□□□ -0.22
AP001527.1-201ENST00000566440 CHMP4AQ9BY43 222 aa13.6□□□□□ -0.23
AP001527.1-201ENST00000566440 ADRA2BP18089 450 aa13.59□□□□□ -0.23
AP001527.1-201ENST00000566440 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
AP001527.1-201ENST00000566440 UBE2Q2Q8WVN8 375 aa13.56□□□□□ -0.24
AP001527.1-201ENST00000566440 CDK11BP21127 795 aaKnown RBP13.52□□□□□ -0.25
AP001527.1-201ENST00000566440 CDK11AQ9UQ88 783 aaPredicted RBP13.52□□□□□ -0.25
AP001527.1-201ENST00000566440 FAM9AQ8IZU1 332 aaPredicted RBP13.51□□□□□ -0.25
AP001527.1-201ENST00000566440 ZCCHC6Q5VYS8 1495 aaKnown RBP13.5□□□□□ -0.25
AP001527.1-201ENST00000566440 CNKSR2Q8WXI2 1034 aa13.49□□□□□ -0.25
AP001527.1-201ENST00000566440 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
AP001527.1-201ENST00000566440 SHROOM4Q9ULL8 1493 aa13.45□□□□□ -0.26
AP001527.1-201ENST00000566440 SENP3Q9H4L4 574 aaPredicted RBP13.43□□□□□ -0.26
AP001527.1-201ENST00000566440 PPP6R1Q9UPN7 881 aa13.4□□□□□ -0.26
AP001527.1-201ENST00000566440 PDE4CQ08493 712 aa13.38□□□□□ -0.27
AP001527.1-201ENST00000566440 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
AP001527.1-201ENST00000566440 IGSF3O75054 1194 aa13.36□□□□□ -0.27
AP001527.1-201ENST00000566440 BRD2P25440 801 aaKnown RBP13.36□□□□□ -0.27
AP001527.1-201ENST00000566440 DHX37Q8IY37 1157 aaKnown RBP13.34□□□□□ -0.27
AP001527.1-201ENST00000566440 HMGB1P09429 215 aaKnown RBP13.31□□□□□ -0.28
AP001527.1-201ENST00000566440 HSP90B1P14625 803 aaKnown RBP13.31□□□□□ -0.28
AP001527.1-201ENST00000566440 CCDC9Q9Y3X0 531 aaKnown RBP13.29□□□□□ -0.28
AP001527.1-201ENST00000566440 TAF7LQ5H9L4 462 aa13.27□□□□□ -0.28
AP001527.1-201ENST00000566440 NBR1Q14596 966 aa13.26□□□□□ -0.29
AP001527.1-201ENST00000566440 NEFLP07196 543 aa13.24□□□□□ -0.29
AP001527.1-201ENST00000566440 MYO15BQ96JP2 1530 aa13.23□□□□□ -0.29
AP001527.1-201ENST00000566440 DCAF1Q9Y4B6 1507 aa13.22□□□□□ -0.29
AP001527.1-201ENST00000566440 PAXIP1Q6ZW49 1069 aaPredicted RBP13.13□□□□□ -0.31
AP001527.1-201ENST00000566440 PUS7Q96PZ0 661 aaKnown RBP13.11□□□□□ -0.31
AP001527.1-201ENST00000566440 CFAP44Q96MT7 982 aa13.1□□□□□ -0.31
AP001527.1-201ENST00000566440 PKNOX2Q96KN3 472 aa13.08□□□□□ -0.32
AP001527.1-201ENST00000566440 TSHZ2Q9NRE2 1034 aa13.05□□□□□ -0.32
AP001527.1-201ENST00000566440 ZBTB7CA1YPR0 619 aa13.05□□□□□ -0.32
AP001527.1-201ENST00000566440 PCGF6Q9BYE7 350 aa13.05□□□□□ -0.32
AP001527.1-201ENST00000566440 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
AP001527.1-201ENST00000566440 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.32
AP001527.1-201ENST00000566440 POLR3GLQ9BT43 218 aa13.01□□□□□ -0.33
AP001527.1-201ENST00000566440 BCL11BQ9C0K0 894 aaPredicted RBP13.01□□□□□ -0.33
AP001527.1-201ENST00000566440 ARID3AQ99856 593 aa13□□□□□ -0.33
AP001527.1-201ENST00000566440 NECTIN2Q92692 538 aa12.96□□□□□ -0.33
AP001527.1-201ENST00000566440 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
AP001527.1-201ENST00000566440 ZEB1P37275 1124 aaPredicted RBP12.9□□□□□ -0.34
AP001527.1-201ENST00000566440 FGD1P98174 961 aa12.9□□□□□ -0.34
AP001527.1-201ENST00000566440 PPP4R3CPQ6ZMV5 832 aa12.9□□□□□ -0.34
AP001527.1-201ENST00000566440 TRHP20396 242 aaPredicted RBP12.9□□□□□ -0.34
AP001527.1-201ENST00000566440 BCCIPQ9P287 314 aaKnown RBP eCLIP12.9□□□□□ -0.34
AP001527.1-201ENST00000566440 ABCC9O60706 1549 aa12.86□□□□□ -0.35
AP001527.1-201ENST00000566440 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms