RNA–Protein interactions for RNA: ENST00000416430.1

VWC2L-IT1-201, VWC2L intronic transcript 1, humanhuman

TSL 3 BASIC

Gene VWC2L-IT1, Length 467 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWC2L-IT1-201ENST00000416430 NISCHQ9Y2I1 1504 aa15.5■□□□□ 0.07
VWC2L-IT1-201ENST00000416430 ABCC9O60706 1549 aa13.38□□□□□ -0.27
VWC2L-IT1-201ENST00000416430 DNAJC5BQ9UF47 199 aa13.29□□□□□ -0.28
VWC2L-IT1-201ENST00000416430 CCDC180Q9P1Z9 1646 aa13.27□□□□□ -0.29
VWC2L-IT1-201ENST00000416430 ZCCHC6Q5VYS8 1495 aaKnown RBP13.22□□□□□ -0.29
VWC2L-IT1-201ENST00000416430 SHROOM4Q9ULL8 1493 aa13□□□□□ -0.33
VWC2L-IT1-201ENST00000416430 HRCP23327 699 aa12.93□□□□□ -0.34
VWC2L-IT1-201ENST00000416430 DCAF1Q9Y4B6 1507 aa12.91□□□□□ -0.34
VWC2L-IT1-201ENST00000416430 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
VWC2L-IT1-201ENST00000416430 SUPT5HO00267 1087 aaKnown RBP12.87□□□□□ -0.35
VWC2L-IT1-201ENST00000416430 CHIC1Q5VXU3 224 aa12.83□□□□□ -0.36
VWC2L-IT1-201ENST00000416430 AEBP2Q6ZN18 517 aaPredicted RBP12.71□□□□□ -0.37
VWC2L-IT1-201ENST00000416430 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
VWC2L-IT1-201ENST00000416430 PCGF6Q9BYE7 350 aa12.54□□□□□ -0.4
VWC2L-IT1-201ENST00000416430 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
VWC2L-IT1-201ENST00000416430 TRIM26Q12899 539 aaPredicted RBP12.43□□□□□ -0.42
VWC2L-IT1-201ENST00000416430 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
VWC2L-IT1-201ENST00000416430 PPARGC1BQ86YN6 1023 aaKnown RBP12.37□□□□□ -0.43
VWC2L-IT1-201ENST00000416430 RB1CC1Q8TDY2 1594 aa12.32□□□□□ -0.44
VWC2L-IT1-201ENST00000416430 PELP1Q8IZL8 1130 aaKnown RBP12.32□□□□□ -0.44
VWC2L-IT1-201ENST00000416430 RSF1Q96T23 1441 aaPredicted RBP12.28□□□□□ -0.44
VWC2L-IT1-201ENST00000416430 LOC105371045A0A1W2PR82 267 aa12.28□□□□□ -0.44
VWC2L-IT1-201ENST00000416430 DCAF8L2P0C7V8 631 aa12.27□□□□□ -0.45
VWC2L-IT1-201ENST00000416430 SCRIBQ14160 1630 aa12.18□□□□□ -0.46
VWC2L-IT1-201ENST00000416430 NACADO15069 1562 aa12.1□□□□□ -0.47
VWC2L-IT1-201ENST00000416430 EIF4G1Q04637 1599 aaKnown RBP12.09□□□□□ -0.47
VWC2L-IT1-201ENST00000416430 CECR2Q9BXF3 1484 aa12.09□□□□□ -0.47
VWC2L-IT1-201ENST00000416430 TRIM41Q8WV44 630 aa12.08□□□□□ -0.48
VWC2L-IT1-201ENST00000416430 BAZ1AQ9NRL2 1556 aaPredicted RBP12.05□□□□□ -0.48
VWC2L-IT1-201ENST00000416430 MROH2BQ7Z745 1585 aa11.98□□□□□ -0.49
VWC2L-IT1-201ENST00000416430 BICRAQ9NZM4 1560 aa11.98□□□□□ -0.49
VWC2L-IT1-201ENST00000416430 SCAF1Q9H7N4 1312 aaKnown RBP11.98□□□□□ -0.49
VWC2L-IT1-201ENST00000416430 WRNQ14191 1432 aaPredicted RBP eCLIP11.97□□□□□ -0.49
VWC2L-IT1-201ENST00000416430 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
VWC2L-IT1-201ENST00000416430 WIZO95785 1651 aa11.96□□□□□ -0.5
VWC2L-IT1-201ENST00000416430 UNC13AQ9UPW8 1703 aa11.95□□□□□ -0.5
VWC2L-IT1-201ENST00000416430 TOP2AP11388 1531 aaKnown RBP11.87□□□□□ -0.51
VWC2L-IT1-201ENST00000416430 ACIN1Q9UKV3 1341 aaKnown RBP11.86□□□□□ -0.51
VWC2L-IT1-201ENST00000416430 MYT1Q01538 1121 aa11.86□□□□□ -0.51
VWC2L-IT1-201ENST00000416430 EEA1Q15075 1411 aa11.84□□□□□ -0.51
VWC2L-IT1-201ENST00000416430 FAM9AQ8IZU1 332 aaPredicted RBP11.82□□□□□ -0.52
VWC2L-IT1-201ENST00000416430 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
VWC2L-IT1-201ENST00000416430 TNIKQ9UKE5 1360 aa11.79□□□□□ -0.52
VWC2L-IT1-201ENST00000416430 SMARCA4P51532 1647 aa11.78□□□□□ -0.52
VWC2L-IT1-201ENST00000416430 CENPBP07199 599 aaPredicted RBP11.77□□□□□ -0.53
VWC2L-IT1-201ENST00000416430 CEP162Q5TB80 1403 aa11.75□□□□□ -0.53
VWC2L-IT1-201ENST00000416430 CCER1Q8TC90 406 aaPredicted RBP11.74□□□□□ -0.53
VWC2L-IT1-201ENST00000416430 CUX2O14529 1486 aa11.72□□□□□ -0.53
VWC2L-IT1-201ENST00000416430 NEUROD1Q13562 356 aa11.72□□□□□ -0.53
VWC2L-IT1-201ENST00000416430 DIEXFQ68CQ4 756 aaKnown RBP11.71□□□□□ -0.53
VWC2L-IT1-201ENST00000416430 CCDC88BA6NC98 1476 aa11.7□□□□□ -0.54
VWC2L-IT1-201ENST00000416430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
VWC2L-IT1-201ENST00000416430 ABCC8Q09428 1581 aa11.7□□□□□ -0.54
VWC2L-IT1-201ENST00000416430 KIF21BO75037 1637 aa11.69□□□□□ -0.54
VWC2L-IT1-201ENST00000416430 GOLGA3Q08378 1498 aa11.68□□□□□ -0.54
VWC2L-IT1-201ENST00000416430 PEG3Q9GZU2 1588 aa11.66□□□□□ -0.54
VWC2L-IT1-201ENST00000416430 ZNF316A6NFI3 1004 aaPredicted RBP11.62□□□□□ -0.55
VWC2L-IT1-201ENST00000416430 GTF3C3Q9Y5Q9 886 aa11.62□□□□□ -0.55
VWC2L-IT1-201ENST00000416430 SOGA1O94964 1423 aa11.6□□□□□ -0.55
VWC2L-IT1-201ENST00000416430 BAZ1BQ9UIG0 1483 aaKnown RBP11.6□□□□□ -0.55
VWC2L-IT1-201ENST00000416430 CEP164Q9UPV0 1460 aa11.59□□□□□ -0.55
VWC2L-IT1-201ENST00000416430 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
VWC2L-IT1-201ENST00000416430 ERCC6Q03468 1493 aa11.57□□□□□ -0.56
VWC2L-IT1-201ENST00000416430 EHMT2Q96KQ7 1210 aa11.55□□□□□ -0.56
VWC2L-IT1-201ENST00000416430 RUSC2Q8N2Y8 1516 aa11.53□□□□□ -0.56
VWC2L-IT1-201ENST00000416430 CLSPNQ9HAW4 1339 aa11.53□□□□□ -0.56
VWC2L-IT1-201ENST00000416430 VPS8Q8N3P4 1428 aa11.52□□□□□ -0.56
VWC2L-IT1-201ENST00000416430 SYNJ1O43426 1573 aa11.51□□□□□ -0.57
VWC2L-IT1-201ENST00000416430 CLIP1P30622 1438 aa11.47□□□□□ -0.57
VWC2L-IT1-201ENST00000416430 ERICH3Q5RHP9 1530 aa11.45□□□□□ -0.58
VWC2L-IT1-201ENST00000416430 BIVM-ERCC5R4GMW8 1640 aa11.45□□□□□ -0.58
VWC2L-IT1-201ENST00000416430 TOP2BQ02880 1626 aa11.43□□□□□ -0.58
VWC2L-IT1-201ENST00000416430 UBTFP17480 764 aaKnown RBP11.42□□□□□ -0.58
VWC2L-IT1-201ENST00000416430 MIER1Q8N108 512 aa11.39□□□□□ -0.59
VWC2L-IT1-201ENST00000416430 RAPGEF2Q9Y4G8 1499 aa11.36□□□□□ -0.59
VWC2L-IT1-201ENST00000416430 ATAD2BQ9ULI0 1458 aa11.34□□□□□ -0.59
VWC2L-IT1-201ENST00000416430 DHX57Q6P158 1386 aaKnown RBP11.34□□□□□ -0.59
VWC2L-IT1-201ENST00000416430 RRBP1Q9P2E9 1410 aaKnown RBP11.34□□□□□ -0.59
VWC2L-IT1-201ENST00000416430 PRXQ9BXM0 1461 aa11.33□□□□□ -0.6
VWC2L-IT1-201ENST00000416430 ARAP1Q96P48 1450 aa11.32□□□□□ -0.6
VWC2L-IT1-201ENST00000416430 TTBK1Q5TCY1 1321 aaPredicted RBP11.3□□□□□ -0.6
VWC2L-IT1-201ENST00000416430 APLP2Q06481 763 aa11.29□□□□□ -0.6
VWC2L-IT1-201ENST00000416430 HNRNPUL2Q1KMD3 747 aaKnown RBP11.28□□□□□ -0.6
VWC2L-IT1-201ENST00000416430 NESP48681 1621 aa11.27□□□□□ -0.6
VWC2L-IT1-201ENST00000416430 MAP3K1Q13233 1512 aa11.27□□□□□ -0.61
VWC2L-IT1-201ENST00000416430 YTHDC1Q96MU7 727 aaKnown RBP11.27□□□□□ -0.61
VWC2L-IT1-201ENST00000416430 PRDM2Q13029 1718 aa11.25□□□□□ -0.61
VWC2L-IT1-201ENST00000416430 HMGXB3Q12766 1538 aa11.24□□□□□ -0.61
VWC2L-IT1-201ENST00000416430 OSCARQ8IYS5 282 aa11.21□□□□□ -0.61
VWC2L-IT1-201ENST00000416430 SUPT16HQ9Y5B9 1047 aaKnown RBP11.2□□□□□ -0.62
VWC2L-IT1-201ENST00000416430 THOC2Q8NI27 1593 aaKnown RBP11.18□□□□□ -0.62
VWC2L-IT1-201ENST00000416430 TRHP20396 242 aaPredicted RBP11.17□□□□□ -0.62
VWC2L-IT1-201ENST00000416430 CUX1P39880 1505 aa11.17□□□□□ -0.62
VWC2L-IT1-201ENST00000416430 NCAPD3P42695 1498 aa11.17□□□□□ -0.62
VWC2L-IT1-201ENST00000416430 KIF27Q86VH2 1401 aa11.17□□□□□ -0.62
VWC2L-IT1-201ENST00000416430 CCNB3Q8WWL7 1395 aa11.16□□□□□ -0.62
VWC2L-IT1-201ENST00000416430 TIAM1Q13009 1591 aa11.16□□□□□ -0.62
VWC2L-IT1-201ENST00000416430 MAPKBP1O60336 1514 aa11.16□□□□□ -0.62
VWC2L-IT1-201ENST00000416430 CFAP43Q8NDM7 1665 aa11.16□□□□□ -0.62
VWC2L-IT1-201ENST00000416430 ARHGAP35Q9NRY4 1499 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms