RNA–Protein interactions for RNA: ENST00000381714.7

HMG20A-202, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,112 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-202ENST00000381714 NISCHQ9Y2I1 1504 aa16.5■□□□□ 0.23
HMG20A-202ENST00000381714 CCDC180Q9P1Z9 1646 aa15.23■□□□□ 0.03
HMG20A-202ENST00000381714 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
HMG20A-202ENST00000381714 MYO15BQ96JP2 1530 aa14.35□□□□□ -0.11
HMG20A-202ENST00000381714 ZCCHC6Q5VYS8 1495 aaKnown RBP14.08□□□□□ -0.16
HMG20A-202ENST00000381714 UNC13AQ9UPW8 1703 aa13.95□□□□□ -0.18
HMG20A-202ENST00000381714 NACADO15069 1562 aa13.65□□□□□ -0.22
HMG20A-202ENST00000381714 SHROOM4Q9ULL8 1493 aa13.52□□□□□ -0.25
HMG20A-202ENST00000381714 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.25
HMG20A-202ENST00000381714 RB1CC1Q8TDY2 1594 aa13.31□□□□□ -0.28
HMG20A-202ENST00000381714 PEG3Q9GZU2 1588 aa13.31□□□□□ -0.28
HMG20A-202ENST00000381714 ABCC9O60706 1549 aa13.25□□□□□ -0.29
HMG20A-202ENST00000381714 EIF4G1Q04637 1599 aaKnown RBP13.13□□□□□ -0.31
HMG20A-202ENST00000381714 PRDM2Q13029 1718 aa13.02□□□□□ -0.33
HMG20A-202ENST00000381714 SMARCA4P51532 1647 aa12.86□□□□□ -0.35
HMG20A-202ENST00000381714 BAZ1AQ9NRL2 1556 aaPredicted RBP12.83□□□□□ -0.35
HMG20A-202ENST00000381714 SMARCA2P51531 1590 aa12.81□□□□□ -0.36
HMG20A-202ENST00000381714 SCRIBQ14160 1630 aa12.8□□□□□ -0.36
HMG20A-202ENST00000381714 HMGXB3Q12766 1538 aa12.74□□□□□ -0.37
HMG20A-202ENST00000381714 TOP2AP11388 1531 aaKnown RBP12.58□□□□□ -0.4
HMG20A-202ENST00000381714 MROH2BQ7Z745 1585 aa12.57□□□□□ -0.4
HMG20A-202ENST00000381714 WIZO95785 1651 aa12.56□□□□□ -0.4
HMG20A-202ENST00000381714 WDR97A6NE52 1622 aa12.47□□□□□ -0.41
HMG20A-202ENST00000381714 RSF1Q96T23 1441 aaPredicted RBP12.45□□□□□ -0.42
HMG20A-202ENST00000381714 NCAPD3P42695 1498 aa12.45□□□□□ -0.42
HMG20A-202ENST00000381714 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
HMG20A-202ENST00000381714 BIVM-ERCC5R4GMW8 1640 aa12.41□□□□□ -0.42
HMG20A-202ENST00000381714 CC2D2AQ9P2K1 1620 aa12.35□□□□□ -0.43
HMG20A-202ENST00000381714 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
HMG20A-202ENST00000381714 THOC2Q8NI27 1593 aaKnown RBP12.16□□□□□ -0.46
HMG20A-202ENST00000381714 LAMC3Q9Y6N6 1575 aa12.15□□□□□ -0.46
HMG20A-202ENST00000381714 TOP2BQ02880 1626 aa12.09□□□□□ -0.47
HMG20A-202ENST00000381714 CFTRP13569 1480 aa12.08□□□□□ -0.47
HMG20A-202ENST00000381714 KIF21AQ7Z4S6 1674 aa12.08□□□□□ -0.48
HMG20A-202ENST00000381714 CCDC88BA6NC98 1476 aa12.06□□□□□ -0.48
HMG20A-202ENST00000381714 TARBP1Q13395 1621 aaKnown RBP12.03□□□□□ -0.48
HMG20A-202ENST00000381714 PELP1Q8IZL8 1130 aaKnown RBP12.01□□□□□ -0.49
HMG20A-202ENST00000381714 MYT1Q01538 1121 aa12□□□□□ -0.49
HMG20A-202ENST00000381714 ABCA5Q8WWZ7 1642 aa11.99□□□□□ -0.49
HMG20A-202ENST00000381714 WDR62O43379 1518 aa11.98□□□□□ -0.49
HMG20A-202ENST00000381714 SYNJ1O43426 1573 aa11.94□□□□□ -0.5
HMG20A-202ENST00000381714 SUPT5HO00267 1087 aaKnown RBP11.9□□□□□ -0.5
HMG20A-202ENST00000381714 BAZ1BQ9UIG0 1483 aaKnown RBP11.88□□□□□ -0.51
HMG20A-202ENST00000381714 DNMBPQ6XZF7 1577 aa11.86□□□□□ -0.51
HMG20A-202ENST00000381714 SLC24A1O60721 1099 aa11.85□□□□□ -0.51
HMG20A-202ENST00000381714 PBRM1Q86U86 1689 aa11.85□□□□□ -0.51
HMG20A-202ENST00000381714 CUX1P39880 1505 aa11.84□□□□□ -0.51
HMG20A-202ENST00000381714 PCGF6Q9BYE7 350 aa11.84□□□□□ -0.51
HMG20A-202ENST00000381714 KIF21BO75037 1637 aa11.81□□□□□ -0.52
HMG20A-202ENST00000381714 SHROOM2Q13796 1616 aa11.74□□□□□ -0.53
HMG20A-202ENST00000381714 CUL7Q14999 1698 aa11.71□□□□□ -0.54
HMG20A-202ENST00000381714 URB2Q14146 1524 aaKnown RBP11.7□□□□□ -0.54
HMG20A-202ENST00000381714 CTTNBP2Q8WZ74 1663 aa11.7□□□□□ -0.54
HMG20A-202ENST00000381714 LRRIQ1Q96JM4 1722 aa11.69□□□□□ -0.54
HMG20A-202ENST00000381714 ERICH3Q5RHP9 1530 aa11.67□□□□□ -0.54
HMG20A-202ENST00000381714 ABCA10Q8WWZ4 1543 aa11.67□□□□□ -0.54
HMG20A-202ENST00000381714 DCAF8L2P0C7V8 631 aa11.65□□□□□ -0.55
HMG20A-202ENST00000381714 HRCP23327 699 aa11.64□□□□□ -0.55
HMG20A-202ENST00000381714 CUX2O14529 1486 aa11.63□□□□□ -0.55
HMG20A-202ENST00000381714 ABCC8Q09428 1581 aa11.63□□□□□ -0.55
HMG20A-202ENST00000381714 SAMD9Q5K651 1589 aa11.63□□□□□ -0.55
HMG20A-202ENST00000381714 CADPSQ9ULU8 1353 aa11.6□□□□□ -0.55
HMG20A-202ENST00000381714 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
HMG20A-202ENST00000381714 ADAMTS12P58397 1594 aa11.59□□□□□ -0.55
HMG20A-202ENST00000381714 EIF4G3O43432 1585 aaKnown RBP11.54□□□□□ -0.56
HMG20A-202ENST00000381714 PRXQ9BXM0 1461 aa11.53□□□□□ -0.56
HMG20A-202ENST00000381714 PPARGC1BQ86YN6 1023 aaKnown RBP11.5□□□□□ -0.57
HMG20A-202ENST00000381714 NESP48681 1621 aa11.5□□□□□ -0.57
HMG20A-202ENST00000381714 MRC2Q9UBG0 1479 aa11.5□□□□□ -0.57
HMG20A-202ENST00000381714 CENPBP07199 599 aaPredicted RBP11.5□□□□□ -0.57
HMG20A-202ENST00000381714 CLASP1Q7Z460 1538 aa11.49□□□□□ -0.57
HMG20A-202ENST00000381714 RUSC2Q8N2Y8 1516 aa11.49□□□□□ -0.57
HMG20A-202ENST00000381714 FANCD2Q9BXW9 1451 aa11.49□□□□□ -0.57
HMG20A-202ENST00000381714 POLA1P09884 1462 aaPredicted RBP11.47□□□□□ -0.57
HMG20A-202ENST00000381714 TTBK1Q5TCY1 1321 aaPredicted RBP11.46□□□□□ -0.57
HMG20A-202ENST00000381714 CFAP43Q8NDM7 1665 aa11.45□□□□□ -0.58
HMG20A-202ENST00000381714 EHMT2Q96KQ7 1210 aa11.45□□□□□ -0.58
HMG20A-202ENST00000381714 ERICH6Q7L0X2 663 aa11.44□□□□□ -0.58
HMG20A-202ENST00000381714 CHD1O14646 1710 aa11.42□□□□□ -0.58
HMG20A-202ENST00000381714 EEA1Q15075 1411 aa11.41□□□□□ -0.58
HMG20A-202ENST00000381714 ZEB1P37275 1124 aaPredicted RBP11.4□□□□□ -0.59
HMG20A-202ENST00000381714 DNAJC5BQ9UF47 199 aa11.4□□□□□ -0.59
HMG20A-202ENST00000381714 ADCY10Q96PN6 1610 aa11.39□□□□□ -0.59
HMG20A-202ENST00000381714 CEP164Q9UPV0 1460 aa11.39□□□□□ -0.59
HMG20A-202ENST00000381714 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
HMG20A-202ENST00000381714 FGD5Q6ZNL6 1462 aa11.38□□□□□ -0.59
HMG20A-202ENST00000381714 WRNQ14191 1432 aaPredicted RBP eCLIP11.36□□□□□ -0.59
HMG20A-202ENST00000381714 CEP170Q5SW79 1584 aa11.34□□□□□ -0.59
HMG20A-202ENST00000381714 IFT140Q96RY7 1462 aa11.34□□□□□ -0.59
HMG20A-202ENST00000381714 MAP3K1Q13233 1512 aa11.34□□□□□ -0.59
HMG20A-202ENST00000381714 UGGT2Q9NYU1 1516 aa11.33□□□□□ -0.6
HMG20A-202ENST00000381714 ARHGEF11O15085 1522 aa11.32□□□□□ -0.6
HMG20A-202ENST00000381714 PDS5BQ9NTI5 1447 aa11.28□□□□□ -0.6
HMG20A-202ENST00000381714 NUP160Q12769 1436 aa11.27□□□□□ -0.6
HMG20A-202ENST00000381714 YTHDC1Q96MU7 727 aaKnown RBP11.27□□□□□ -0.61
HMG20A-202ENST00000381714 MAGI1Q96QZ7 1491 aaPredicted RBP11.25□□□□□ -0.61
HMG20A-202ENST00000381714 EFCAB5A4FU69 1503 aa11.24□□□□□ -0.61
HMG20A-202ENST00000381714 KDM5BQ9UGL1 1544 aa11.23□□□□□ -0.61
HMG20A-202ENST00000381714 AQRO60306 1485 aaKnown RBP eCLIP11.23□□□□□ -0.614e-6■■■■□ 24.4
HMG20A-202ENST00000381714 CCER1Q8TC90 406 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms