Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 AL355333.1-201ENST00000605632 279 ntBASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 AC139795.3-201ENST00000606358 541 ntBASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 SNORA35B-201ENST00000607417 129 ntBASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 AC063962.1-201ENST00000608199 521 ntBASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 CXADRP3-202ENST00000617265 1100 ntBASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 AC073857.1-201ENST00000625082 1054 ntBASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 AL139254.3-201ENST00000641097 674 ntBASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 AC102941.1-201ENST00000567616 1537 ntBASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC187A0A096LP49 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 SNORA7A-201ENST00000384765 139 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 GAPDHP51-201ENST00000426454 1000 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AC018804.1-201ENST00000430381 618 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AC245291.3-201ENST00000443400 292 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 UBE2CP1-201ENST00000557130 554 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AL731537.2-201ENST00000561565 951 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AC096708.2-201ENST00000577676 512 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 DIMT1P1-201ENST00000603970 763 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AC127071.2-201ENST00000623293 527 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AC068213.1-201ENST00000625124 226 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AL163152.1-201ENST00000642001 374 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AC104162.1-201ENST00000430831 2382 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 AC217777.1-201ENST00000570034 1471 ntBASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC187A0A096LP49 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 AL133320.1-201ENST00000621423 2352 ntBASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 AC061975.5-201ENST00000584928 1441 ntBASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 AC123769.2-201ENST00000624332 5984 ntBASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 AC241584.2-201ENST00000637142 2090 ntBASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 RNU6-1017P-201ENST00000363613 106 ntBASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 RN7SKP107-201ENST00000364157 290 ntBASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 RNU6-891P-201ENST00000384280 111 ntBASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 CNN3P1-201ENST00000401596 935 ntBASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 AL355375.1-201ENST00000405686 392 ntBASIC6.69□□□□□ -1.34
CCDC187A0A096LP49 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms