RNA–Protein interactions for RNA: ENST00000639601.1

KCNMA1-266, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 11,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-266ENST00000639601 NISCHQ9Y2I1 1504 aa12.79□□□□□ -0.36
KCNMA1-266ENST00000639601 DCAF8L2P0C7V8 631 aa12.5□□□□□ -0.41
KCNMA1-266ENST00000639601 SUPT5HO00267 1087 aaKnown RBP12.33□□□□□ -0.44
KCNMA1-266ENST00000639601 SHROOM4Q9ULL8 1493 aa12.14□□□□□ -0.47
KCNMA1-266ENST00000639601 PCGF6Q9BYE7 350 aa11.83□□□□□ -0.52
KCNMA1-266ENST00000639601 PELP1Q8IZL8 1130 aaKnown RBP11.73□□□□□ -0.53
KCNMA1-266ENST00000639601 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
KCNMA1-266ENST00000639601 ZEB1P37275 1124 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-266ENST00000639601 FAM9AQ8IZU1 332 aaPredicted RBP11.55□□□□□ -0.56
KCNMA1-266ENST00000639601 CENPBP07199 599 aaPredicted RBP11.54□□□□□ -0.56
KCNMA1-266ENST00000639601 APLP2Q06481 763 aa11.53□□□□□ -0.56
KCNMA1-266ENST00000639601 HRCP23327 699 aa11.49□□□□□ -0.57
KCNMA1-266ENST00000639601 TRIM41Q8WV44 630 aa11.44□□□□□ -0.58
KCNMA1-266ENST00000639601 TTBK1Q5TCY1 1321 aaPredicted RBP11.4□□□□□ -0.59
KCNMA1-266ENST00000639601 CCER1Q8TC90 406 aaPredicted RBP11.39□□□□□ -0.59
KCNMA1-266ENST00000639601 MYT1Q01538 1121 aa11.38□□□□□ -0.59
KCNMA1-266ENST00000639601 TRIM26Q12899 539 aaPredicted RBP11.34□□□□□ -0.59
KCNMA1-266ENST00000639601 CHIC1Q5VXU3 224 aa11.32□□□□□ -0.6
KCNMA1-266ENST00000639601 UBTFP17480 764 aaKnown RBP11.21□□□□□ -0.61
KCNMA1-266ENST00000639601 YTHDC1Q96MU7 727 aaKnown RBP11.18□□□□□ -0.62
KCNMA1-266ENST00000639601 PPARGC1BQ86YN6 1023 aaKnown RBP11.16□□□□□ -0.62
KCNMA1-266ENST00000639601 LOC105371045A0A1W2PR82 267 aa11.15□□□□□ -0.62
KCNMA1-266ENST00000639601 NEFLP07196 543 aa11.13□□□□□ -0.63
KCNMA1-266ENST00000639601 RANGAP1P46060 587 aaPredicted RBP11.13□□□□□ -0.63
KCNMA1-266ENST00000639601 ERICH6Q7L0X2 663 aa11.11□□□□□ -0.63
KCNMA1-266ENST00000639601 DIEXFQ68CQ4 756 aaKnown RBP10.94□□□□□ -0.66
KCNMA1-266ENST00000639601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.93□□□□□ -0.66
KCNMA1-266ENST00000639601 ATP1B4Q9UN42 357 aaPredicted RBP10.9□□□□□ -0.66
KCNMA1-266ENST00000639601 HNRNPUL2Q1KMD3 747 aaKnown RBP10.89□□□□□ -0.67
KCNMA1-266ENST00000639601 DCAF1Q9Y4B6 1507 aa10.82□□□□□ -0.68
KCNMA1-266ENST00000639601 GTF3C3Q9Y5Q9 886 aa10.8□□□□□ -0.68
KCNMA1-266ENST00000639601 ITGAEP38570 1179 aa10.79□□□□□ -0.68
KCNMA1-266ENST00000639601 ACIN1Q9UKV3 1341 aaKnown RBP10.76□□□□□ -0.69
KCNMA1-266ENST00000639601 ZNF316A6NFI3 1004 aaPredicted RBP10.69□□□□□ -0.7
KCNMA1-266ENST00000639601 ZCCHC6Q5VYS8 1495 aaKnown RBP10.67□□□□□ -0.7
KCNMA1-266ENST00000639601 DAXXQ9UER7 740 aaPredicted RBP10.64□□□□□ -0.71
KCNMA1-266ENST00000639601 RTL5Q5HYW3 569 aaPredicted RBP10.61□□□□□ -0.71
KCNMA1-266ENST00000639601 POLR3GLQ9BT43 218 aa10.59□□□□□ -0.71
KCNMA1-266ENST00000639601 CLSPNQ9HAW4 1339 aa10.59□□□□□ -0.71
KCNMA1-266ENST00000639601 BCANQ96GW7 911 aa10.59□□□□□ -0.71
KCNMA1-266ENST00000639601 MYO15BQ96JP2 1530 aa10.56□□□□□ -0.72
KCNMA1-266ENST00000639601 CCDC180Q9P1Z9 1646 aa10.55□□□□□ -0.72
KCNMA1-266ENST00000639601 CSRNP3Q8WYN3 585 aa10.55□□□□□ -0.72
KCNMA1-266ENST00000639601 FAM50AQ14320 339 aaKnown RBP10.54□□□□□ -0.72
KCNMA1-266ENST00000639601 SCAF1Q9H7N4 1312 aaKnown RBP10.54□□□□□ -0.72
KCNMA1-266ENST00000639601 ANP32CO43423 234 aa10.53□□□□□ -0.72
KCNMA1-266ENST00000639601 ABCC9O60706 1549 aa10.52□□□□□ -0.73
KCNMA1-266ENST00000639601 NEUROD1Q13562 356 aa10.52□□□□□ -0.73
KCNMA1-266ENST00000639601 CNGB1Q14028 1251 aaPredicted RBP10.49□□□□□ -0.73
KCNMA1-266ENST00000639601 CDK11AQ9UQ88 783 aaPredicted RBP10.48□□□□□ -0.73
KCNMA1-266ENST00000639601 SCRIBQ14160 1630 aa10.47□□□□□ -0.73
KCNMA1-266ENST00000639601 PABPN1Q86U42 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
KCNMA1-266ENST00000639601 TRIM52Q96A61 297 aa10.4□□□□□ -0.74
KCNMA1-266ENST00000639601 MIER1Q8N108 512 aa10.35□□□□□ -0.75
KCNMA1-266ENST00000639601 ZNF326Q5BKZ1 582 aaKnown RBP10.33□□□□□ -0.76
KCNMA1-266ENST00000639601 FKBP8Q14318 412 aa10.32□□□□□ -0.76
KCNMA1-266ENST00000639601 ANP32AP39687 249 aaKnown RBP10.32□□□□□ -0.76
KCNMA1-266ENST00000639601 CLIP1P30622 1438 aa10.32□□□□□ -0.76
KCNMA1-266ENST00000639601 TONSLQ96HA7 1378 aa10.31□□□□□ -0.76
KCNMA1-266ENST00000639601 EEA1Q15075 1411 aa10.3□□□□□ -0.76
KCNMA1-266ENST00000639601 RSF1Q96T23 1441 aaPredicted RBP10.3□□□□□ -0.76
KCNMA1-266ENST00000639601 MYT1LQ9UL68 1186 aa10.29□□□□□ -0.76
KCNMA1-266ENST00000639601 CEP162Q5TB80 1403 aa10.29□□□□□ -0.76
KCNMA1-266ENST00000639601 DDX10Q13206 875 aaKnown RBP10.27□□□□□ -0.76
KCNMA1-266ENST00000639601 HNRNPUQ00839 825 aaKnown RBP eCLIP10.25□□□□□ -0.77
KCNMA1-266ENST00000639601 P3H3Q8IVL6 736 aa10.23□□□□□ -0.77
KCNMA1-266ENST00000639601 SLC4A1APQ9BWU0 796 aaKnown RBP10.22□□□□□ -0.77
KCNMA1-266ENST00000639601 GOLGA3Q08378 1498 aa10.22□□□□□ -0.77
KCNMA1-266ENST00000639601 TNIKQ9UKE5 1360 aa10.19□□□□□ -0.78
KCNMA1-266ENST00000639601 NPM2Q86SE8 214 aaKnown RBP10.18□□□□□ -0.78
KCNMA1-266ENST00000639601 RB1CC1Q8TDY2 1594 aa10.17□□□□□ -0.78
KCNMA1-266ENST00000639601 CANXP27824 592 aaKnown RBP10.17□□□□□ -0.78
KCNMA1-266ENST00000639601 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
KCNMA1-266ENST00000639601 CCDC136Q96JN2 1154 aa10.15□□□□□ -0.79
KCNMA1-266ENST00000639601 FAM9BQ8IZU0 186 aa10.14□□□□□ -0.79
KCNMA1-266ENST00000639601 ANP32EQ9BTT0 268 aa10.14□□□□□ -0.79
KCNMA1-266ENST00000639601 MRS2Q9HD23 443 aa10.14□□□□□ -0.79
KCNMA1-266ENST00000639601 ARID3CA6NKF2 412 aa10.12□□□□□ -0.79
KCNMA1-266ENST00000639601 CEP164Q9UPV0 1460 aa10.12□□□□□ -0.79
KCNMA1-266ENST00000639601 WRNQ14191 1432 aaPredicted RBP eCLIP10.12□□□□□ -0.79
KCNMA1-266ENST00000639601 NBR1Q14596 966 aa10.09□□□□□ -0.79
KCNMA1-266ENST00000639601 ZBTB47Q9UFB7 747 aaPredicted RBP10.09□□□□□ -0.79
KCNMA1-266ENST00000639601 NACADO15069 1562 aa10.09□□□□□ -0.79
KCNMA1-266ENST00000639601 IRX6P78412 446 aaPredicted RBP10.08□□□□□ -0.8
KCNMA1-266ENST00000639601 MTUS2Q5JR59 1369 aa10.08□□□□□ -0.8
KCNMA1-266ENST00000639601 SUPT16HQ9Y5B9 1047 aaKnown RBP10.06□□□□□ -0.8
KCNMA1-266ENST00000639601 ZNF777Q9ULD5 760 aaPredicted RBP10.06□□□□□ -0.8
KCNMA1-266ENST00000639601 EIF5BO60841 1220 aaKnown RBP10.06□□□□□ -0.8
KCNMA1-266ENST00000639601 HIRIP3Q9BW71 556 aaPredicted RBP10.05□□□□□ -0.8
KCNMA1-266ENST00000639601 BAZ1AQ9NRL2 1556 aaPredicted RBP10.05□□□□□ -0.8
KCNMA1-266ENST00000639601 TMC1Q8TDI8 760 aa10.05□□□□□ -0.8
KCNMA1-266ENST00000639601 EIF4G2P78344 907 aaKnown RBP eCLIP10.03□□□□□ -0.8
KCNMA1-266ENST00000639601 CHIC2Q9UKJ5 165 aa10.03□□□□□ -0.8
KCNMA1-266ENST00000639601 FBLN2P98095 1184 aa10.02□□□□□ -0.81
KCNMA1-266ENST00000639601 KIF27Q86VH2 1401 aa10.02□□□□□ -0.81
KCNMA1-266ENST00000639601 UPF2Q9HAU5 1272 aaKnown RBP10.01□□□□□ -0.81
KCNMA1-266ENST00000639601 VPS8Q8N3P4 1428 aa10.01□□□□□ -0.81
KCNMA1-266ENST00000639601 CCNB3Q8WWL7 1395 aa10□□□□□ -0.81
KCNMA1-266ENST00000639601 NEFMP07197 916 aa9.99□□□□□ -0.81
KCNMA1-266ENST00000639601 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms