RNA–Protein interactions for RNA: ENST00000549914.1

LINC02413-201, Transcript of long intergenic non-protein coding RNA 2413, humanhuman

TSL 5 BASIC

Gene LINC02413, Length 723 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02413-201ENST00000549914 AEBP2Q6ZN18 517 aaPredicted RBP20.18■□□□□ 0.82
LINC02413-201ENST00000549914 CHIC1Q5VXU3 224 aa19.98■□□□□ 0.79
LINC02413-201ENST00000549914 PHF23Q9BUL5 403 aaPredicted RBP17.53■□□□□ 0.4
LINC02413-201ENST00000549914 SENP3Q9H4L4 574 aaPredicted RBP17.18■□□□□ 0.34
LINC02413-201ENST00000549914 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
LINC02413-201ENST00000549914 NISCHQ9Y2I1 1504 aa16.29■□□□□ 0.2
LINC02413-201ENST00000549914 FOXD1Q16676 465 aa15.86■□□□□ 0.13
LINC02413-201ENST00000549914 ADRA2BP18089 450 aa15.42■□□□□ 0.06
LINC02413-201ENST00000549914 PPP6R1Q9UPN7 881 aa15.39■□□□□ 0.05
LINC02413-201ENST00000549914 PIAS4Q8N2W9 510 aaPredicted RBP15.06■□□□□ 0
LINC02413-201ENST00000549914 MSH5O43196 834 aa14.62□□□□□ -0.07
LINC02413-201ENST00000549914 CCDC180Q9P1Z9 1646 aa14.5□□□□□ -0.09
LINC02413-201ENST00000549914 PPP4R3CPQ6ZMV5 832 aa14.41□□□□□ -0.1
LINC02413-201ENST00000549914 KCNA4P22459 653 aa14.3□□□□□ -0.12
LINC02413-201ENST00000549914 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
LINC02413-201ENST00000549914 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
LINC02413-201ENST00000549914 ABCC9O60706 1549 aa14.07□□□□□ -0.16
LINC02413-201ENST00000549914 CNKSR2Q8WXI2 1034 aa13.97□□□□□ -0.17
LINC02413-201ENST00000549914 MAPK8IP2Q13387 824 aaPredicted RBP13.9□□□□□ -0.18
LINC02413-201ENST00000549914 NPM3O75607 178 aaKnown RBP13.88□□□□□ -0.19
LINC02413-201ENST00000549914 DMRT2Q9Y5R5 561 aa13.72□□□□□ -0.21
LINC02413-201ENST00000549914 SLC4A1APQ9BWU0 796 aaKnown RBP13.7□□□□□ -0.22
LINC02413-201ENST00000549914 NACADO15069 1562 aa13.66□□□□□ -0.22
LINC02413-201ENST00000549914 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
LINC02413-201ENST00000549914 RNF216Q9NWF9 866 aaPredicted RBP13.65□□□□□ -0.22
LINC02413-201ENST00000549914 DCAF8L2P0C7V8 631 aa13.63□□□□□ -0.23
LINC02413-201ENST00000549914 MYO15BQ96JP2 1530 aa13.62□□□□□ -0.23
LINC02413-201ENST00000549914 EHMT2Q96KQ7 1210 aa13.56□□□□□ -0.24
LINC02413-201ENST00000549914 ZCCHC6Q5VYS8 1495 aaKnown RBP13.55□□□□□ -0.24
LINC02413-201ENST00000549914 DCAF1Q9Y4B6 1507 aa13.55□□□□□ -0.24
LINC02413-201ENST00000549914 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
LINC02413-201ENST00000549914 DNAJC5BQ9UF47 199 aa13.45□□□□□ -0.26
LINC02413-201ENST00000549914 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
LINC02413-201ENST00000549914 CSRNP3Q8WYN3 585 aa13.25□□□□□ -0.29
LINC02413-201ENST00000549914 SHROOM4Q9ULL8 1493 aa13.19□□□□□ -0.3
LINC02413-201ENST00000549914 UNC13AQ9UPW8 1703 aa13.16□□□□□ -0.3
LINC02413-201ENST00000549914 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC02413-201ENST00000549914 DCAF8L1A6NGE4 600 aa13.15□□□□□ -0.3
LINC02413-201ENST00000549914 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
LINC02413-201ENST00000549914 ZBTB22O15209 634 aa13.14□□□□□ -0.31
LINC02413-201ENST00000549914 SCRIBQ14160 1630 aa13.13□□□□□ -0.31
LINC02413-201ENST00000549914 BICRAQ9NZM4 1560 aa13.1□□□□□ -0.31
LINC02413-201ENST00000549914 SLC4A2P04920 1241 aa13.02□□□□□ -0.33
LINC02413-201ENST00000549914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.34
LINC02413-201ENST00000549914 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
LINC02413-201ENST00000549914 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
LINC02413-201ENST00000549914 CC2D2AQ9P2K1 1620 aa12.73□□□□□ -0.37
LINC02413-201ENST00000549914 U3KPZ7 1027 aaPredicted RBP12.7□□□□□ -0.38
LINC02413-201ENST00000549914 CECR2Q9BXF3 1484 aa12.7□□□□□ -0.38
LINC02413-201ENST00000549914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.69□□□□□ -0.38
LINC02413-201ENST00000549914 HNRNPUL2Q1KMD3 747 aaKnown RBP12.69□□□□□ -0.38
LINC02413-201ENST00000549914 ATXN8OSP0DMR3 200 aa12.67□□□□□ -0.38
LINC02413-201ENST00000549914 BAZ1AQ9NRL2 1556 aaPredicted RBP12.67□□□□□ -0.38
LINC02413-201ENST00000549914 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
LINC02413-201ENST00000549914 SMARCA2P51531 1590 aa12.61□□□□□ -0.39
LINC02413-201ENST00000549914 SMARCA4P51532 1647 aa12.6□□□□□ -0.39
LINC02413-201ENST00000549914 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
LINC02413-201ENST00000549914 ATAD2BQ9ULI0 1458 aa12.55□□□□□ -0.4
LINC02413-201ENST00000549914 APLP2Q06481 763 aa12.53□□□□□ -0.4
LINC02413-201ENST00000549914 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.4
LINC02413-201ENST00000549914 HMGXB3Q12766 1538 aa12.52□□□□□ -0.41
LINC02413-201ENST00000549914 RNF39Q9H2S5 420 aa12.5□□□□□ -0.41
LINC02413-201ENST00000549914 MROH2BQ7Z745 1585 aa12.48□□□□□ -0.41
LINC02413-201ENST00000549914 BAZ1BQ9UIG0 1483 aaKnown RBP12.48□□□□□ -0.41
LINC02413-201ENST00000549914 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
LINC02413-201ENST00000549914 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
LINC02413-201ENST00000549914 C1QBPQ07021 282 aaKnown RBP12.39□□□□□ -0.43
LINC02413-201ENST00000549914 WIZO95785 1651 aa12.33□□□□□ -0.44
LINC02413-201ENST00000549914 TOP2AP11388 1531 aaKnown RBP12.29□□□□□ -0.44
LINC02413-201ENST00000549914 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
LINC02413-201ENST00000549914 CAPN15O75808 1086 aa12.26□□□□□ -0.45
LINC02413-201ENST00000549914 SPINK5Q9NQ38 1064 aaPredicted RBP12.26□□□□□ -0.45
LINC02413-201ENST00000549914 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
LINC02413-201ENST00000549914 TRHP20396 242 aaPredicted RBP12.24□□□□□ -0.45
LINC02413-201ENST00000549914 PDS5BQ9NTI5 1447 aa12.23□□□□□ -0.45
LINC02413-201ENST00000549914 CADPSQ9ULU8 1353 aa12.23□□□□□ -0.45
LINC02413-201ENST00000549914 ERCC6Q03468 1493 aa12.22□□□□□ -0.45
LINC02413-201ENST00000549914 NESP48681 1621 aa12.14□□□□□ -0.47
LINC02413-201ENST00000549914 CFTRP13569 1480 aa12.14□□□□□ -0.47
LINC02413-201ENST00000549914 SUPT5HO00267 1087 aaKnown RBP12.13□□□□□ -0.47
LINC02413-201ENST00000549914 CCDC88BA6NC98 1476 aa12.13□□□□□ -0.47
LINC02413-201ENST00000549914 CUX2O14529 1486 aa12.1□□□□□ -0.47
LINC02413-201ENST00000549914 POLA2Q14181 598 aa12.07□□□□□ -0.48
LINC02413-201ENST00000549914 CEP164Q9UPV0 1460 aa12.07□□□□□ -0.48
LINC02413-201ENST00000549914 FANCD2Q9BXW9 1451 aa12.05□□□□□ -0.48
LINC02413-201ENST00000549914 CACNB1Q02641 598 aaPredicted RBP12.04□□□□□ -0.48
LINC02413-201ENST00000549914 MRC2Q9UBG0 1479 aa12.03□□□□□ -0.48
LINC02413-201ENST00000549914 ABCB7O75027 752 aa12.02□□□□□ -0.49
LINC02413-201ENST00000549914 FKBP8Q14318 412 aa12.01□□□□□ -0.49
LINC02413-201ENST00000549914 PRDM2Q13029 1718 aa12□□□□□ -0.49
LINC02413-201ENST00000549914 FBLN2P98095 1184 aa12□□□□□ -0.49
LINC02413-201ENST00000549914 ABCC8Q09428 1581 aa12□□□□□ -0.49
LINC02413-201ENST00000549914 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
LINC02413-201ENST00000549914 THOC2Q8NI27 1593 aaKnown RBP11.97□□□□□ -0.49
LINC02413-201ENST00000549914 ZBTB12Q9Y330 459 aaPredicted RBP11.97□□□□□ -0.49
LINC02413-201ENST00000549914 DSG3P32926 999 aa11.96□□□□□ -0.49
LINC02413-201ENST00000549914 WDR62O43379 1518 aa11.95□□□□□ -0.5
LINC02413-201ENST00000549914 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
LINC02413-201ENST00000549914 URB2Q14146 1524 aaKnown RBP11.87□□□□□ -0.51
LINC02413-201ENST00000549914 DNMBPQ6XZF7 1577 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms