RNA–Protein interactions for RNA: ENST00000432237.2

CD163-203, Transcript of CD163 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD163, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD163-203ENST00000432237 NISCHQ9Y2I1 1504 aa15.29■□□□□ 0.04
CD163-203ENST00000432237 SHROOM4Q9ULL8 1493 aa13.22□□□□□ -0.29
CD163-203ENST00000432237 SUPT5HO00267 1087 aaKnown RBP13.09□□□□□ -0.31
CD163-203ENST00000432237 ZCCHC6Q5VYS8 1495 aaKnown RBP12.98□□□□□ -0.33
CD163-203ENST00000432237 CCDC180Q9P1Z9 1646 aa12.89□□□□□ -0.35
CD163-203ENST00000432237 HRCP23327 699 aa12.83□□□□□ -0.36
CD163-203ENST00000432237 CHIC1Q5VXU3 224 aa12.81□□□□□ -0.36
CD163-203ENST00000432237 MYO15BQ96JP2 1530 aa12.79□□□□□ -0.36
CD163-203ENST00000432237 PCGF6Q9BYE7 350 aa12.67□□□□□ -0.38
CD163-203ENST00000432237 DCAF8L2P0C7V8 631 aa12.67□□□□□ -0.38
CD163-203ENST00000432237 DCAF1Q9Y4B6 1507 aa12.56□□□□□ -0.4
CD163-203ENST00000432237 PPARGC1BQ86YN6 1023 aaKnown RBP12.49□□□□□ -0.41
CD163-203ENST00000432237 LOC105371045A0A1W2PR82 267 aa12.43□□□□□ -0.42
CD163-203ENST00000432237 TRIM26Q12899 539 aaPredicted RBP12.39□□□□□ -0.43
CD163-203ENST00000432237 ABCC9O60706 1549 aa12.3□□□□□ -0.44
CD163-203ENST00000432237 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
CD163-203ENST00000432237 RSF1Q96T23 1441 aaPredicted RBP12.19□□□□□ -0.46
CD163-203ENST00000432237 TRIM41Q8WV44 630 aa12.19□□□□□ -0.46
CD163-203ENST00000432237 EHMT2Q96KQ7 1210 aa12.16□□□□□ -0.46
CD163-203ENST00000432237 SCRIBQ14160 1630 aa12.13□□□□□ -0.47
CD163-203ENST00000432237 RB1CC1Q8TDY2 1594 aa12.1□□□□□ -0.47
CD163-203ENST00000432237 FAM9AQ8IZU1 332 aaPredicted RBP12.09□□□□□ -0.47
CD163-203ENST00000432237 PELP1Q8IZL8 1130 aaKnown RBP12.07□□□□□ -0.48
CD163-203ENST00000432237 SCAF1Q9H7N4 1312 aaKnown RBP11.94□□□□□ -0.5
CD163-203ENST00000432237 CECR2Q9BXF3 1484 aa11.9□□□□□ -0.5
CD163-203ENST00000432237 MROH2BQ7Z745 1585 aa11.89□□□□□ -0.51
CD163-203ENST00000432237 NACADO15069 1562 aa11.88□□□□□ -0.51
CD163-203ENST00000432237 CCER1Q8TC90 406 aaPredicted RBP11.85□□□□□ -0.51
CD163-203ENST00000432237 WIZO95785 1651 aa11.83□□□□□ -0.52
CD163-203ENST00000432237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
CD163-203ENST00000432237 BAZ1AQ9NRL2 1556 aaPredicted RBP11.8□□□□□ -0.52
CD163-203ENST00000432237 TTBK1Q5TCY1 1321 aaPredicted RBP11.79□□□□□ -0.52
CD163-203ENST00000432237 ACIN1Q9UKV3 1341 aaKnown RBP11.78□□□□□ -0.52
CD163-203ENST00000432237 EIF4G1Q04637 1599 aaKnown RBP11.76□□□□□ -0.53
CD163-203ENST00000432237 CENPBP07199 599 aaPredicted RBP11.74□□□□□ -0.53
CD163-203ENST00000432237 DIEXFQ68CQ4 756 aaKnown RBP11.74□□□□□ -0.53
CD163-203ENST00000432237 WRNQ14191 1432 aaPredicted RBP eCLIP11.73□□□□□ -0.53
CD163-203ENST00000432237 NEUROD1Q13562 356 aa11.72□□□□□ -0.53
CD163-203ENST00000432237 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
CD163-203ENST00000432237 TOP2AP11388 1531 aaKnown RBP11.67□□□□□ -0.54
CD163-203ENST00000432237 CCDC88BA6NC98 1476 aa11.66□□□□□ -0.54
CD163-203ENST00000432237 ABCC8Q09428 1581 aa11.66□□□□□ -0.54
CD163-203ENST00000432237 YTHDC1Q96MU7 727 aaKnown RBP11.65□□□□□ -0.54
CD163-203ENST00000432237 GTF3C3Q9Y5Q9 886 aa11.65□□□□□ -0.54
CD163-203ENST00000432237 TNIKQ9UKE5 1360 aa11.65□□□□□ -0.54
CD163-203ENST00000432237 EEA1Q15075 1411 aa11.63□□□□□ -0.55
CD163-203ENST00000432237 SMARCA2P51531 1590 aa11.6□□□□□ -0.55
CD163-203ENST00000432237 SOGA1O94964 1423 aa11.6□□□□□ -0.55
CD163-203ENST00000432237 SMARCA4P51532 1647 aa11.6□□□□□ -0.55
CD163-203ENST00000432237 UBTFP17480 764 aaKnown RBP11.59□□□□□ -0.55
CD163-203ENST00000432237 CSRNP3Q8WYN3 585 aa11.59□□□□□ -0.55
CD163-203ENST00000432237 ZNF316A6NFI3 1004 aaPredicted RBP11.59□□□□□ -0.55
CD163-203ENST00000432237 GOLGA3Q08378 1498 aa11.56□□□□□ -0.56
CD163-203ENST00000432237 MYT1Q01538 1121 aa11.56□□□□□ -0.56
CD163-203ENST00000432237 RUSC2Q8N2Y8 1516 aa11.51□□□□□ -0.57
CD163-203ENST00000432237 CEP164Q9UPV0 1460 aa11.47□□□□□ -0.57
CD163-203ENST00000432237 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.58
CD163-203ENST00000432237 UNC13AQ9UPW8 1703 aa11.44□□□□□ -0.58
CD163-203ENST00000432237 CLIP1P30622 1438 aa11.43□□□□□ -0.58
CD163-203ENST00000432237 KIF21BO75037 1637 aa11.43□□□□□ -0.58
CD163-203ENST00000432237 APLP2Q06481 763 aa11.43□□□□□ -0.58
CD163-203ENST00000432237 MIER1Q8N108 512 aa11.42□□□□□ -0.58
CD163-203ENST00000432237 VPS8Q8N3P4 1428 aa11.4□□□□□ -0.58
CD163-203ENST00000432237 BAZ1BQ9UIG0 1483 aaKnown RBP11.38□□□□□ -0.59
CD163-203ENST00000432237 SYNJ1O43426 1573 aa11.37□□□□□ -0.59
CD163-203ENST00000432237 PEG3Q9GZU2 1588 aa11.35□□□□□ -0.59
CD163-203ENST00000432237 RAPGEF2Q9Y4G8 1499 aa11.32□□□□□ -0.6
CD163-203ENST00000432237 CLSPNQ9HAW4 1339 aa11.31□□□□□ -0.6
CD163-203ENST00000432237 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
CD163-203ENST00000432237 RANGAP1P46060 587 aaPredicted RBP11.29□□□□□ -0.6
CD163-203ENST00000432237 BICRAQ9NZM4 1560 aa11.28□□□□□ -0.6
CD163-203ENST00000432237 ATAD2BQ9ULI0 1458 aa11.25□□□□□ -0.61
CD163-203ENST00000432237 DHX57Q6P158 1386 aaKnown RBP11.25□□□□□ -0.61
CD163-203ENST00000432237 TOP2BQ02880 1626 aa11.22□□□□□ -0.61
CD163-203ENST00000432237 ERICH3Q5RHP9 1530 aa11.22□□□□□ -0.61
CD163-203ENST00000432237 ARAP1Q96P48 1450 aa11.18□□□□□ -0.62
CD163-203ENST00000432237 PRXQ9BXM0 1461 aa11.18□□□□□ -0.62
CD163-203ENST00000432237 BIVM-ERCC5R4GMW8 1640 aa11.17□□□□□ -0.62
CD163-203ENST00000432237 SUPT16HQ9Y5B9 1047 aaKnown RBP11.17□□□□□ -0.62
CD163-203ENST00000432237 RRBP1Q9P2E9 1410 aaKnown RBP11.16□□□□□ -0.62
CD163-203ENST00000432237 KANK4Q5T7N3 995 aaPredicted RBP11.16□□□□□ -0.62
CD163-203ENST00000432237 CUX2O14529 1486 aa11.13□□□□□ -0.63
CD163-203ENST00000432237 CCNB3Q8WWL7 1395 aa11.12□□□□□ -0.63
CD163-203ENST00000432237 KIF27Q86VH2 1401 aa11.11□□□□□ -0.63
CD163-203ENST00000432237 BCANQ96GW7 911 aa11.11□□□□□ -0.63
CD163-203ENST00000432237 ITGAEP38570 1179 aa11.07□□□□□ -0.64
CD163-203ENST00000432237 CUX1P39880 1505 aa11.05□□□□□ -0.64
CD163-203ENST00000432237 ARHGAP35Q9NRY4 1499 aa11.05□□□□□ -0.64
CD163-203ENST00000432237 RAB3GAP2Q9H2M9 1393 aa11.04□□□□□ -0.64
CD163-203ENST00000432237 TSHZ2Q9NRE2 1034 aa11.03□□□□□ -0.64
CD163-203ENST00000432237 HMGXB3Q12766 1538 aa11.01□□□□□ -0.65
CD163-203ENST00000432237 MAPKBP1O60336 1514 aa11□□□□□ -0.65
CD163-203ENST00000432237 SETD5Q9C0A6 1442 aa10.99□□□□□ -0.65
CD163-203ENST00000432237 MAP3K1Q13233 1512 aa10.99□□□□□ -0.65
CD163-203ENST00000432237 NCAPD3P42695 1498 aa10.99□□□□□ -0.65
CD163-203ENST00000432237 TIAM1Q13009 1591 aa10.99□□□□□ -0.65
CD163-203ENST00000432237 KCNH8Q96L42 1107 aa10.98□□□□□ -0.65
CD163-203ENST00000432237 CFTRP13569 1480 aa10.97□□□□□ -0.65
CD163-203ENST00000432237 ANP32EQ9BTT0 268 aa10.96□□□□□ -0.65
CD163-203ENST00000432237 DDX10Q13206 875 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms