Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.09□□□□□ -1.27
HTTP42858 LINC02019-201ENST00000608605 2060 ntBASIC7.09□□□□□ -1.27
HTTP42858 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.09□□□□□ -1.27
HTTP42858 OR5M14P-201ENST00000506803 618 ntBASIC7.09□□□□□ -1.27
HTTP42858 ST13P12-201ENST00000508958 1094 ntBASIC7.09□□□□□ -1.27
HTTP42858 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.09□□□□□ -1.27
HTTP42858 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC7.09□□□□□ -1.27
HTTP42858 KDM5D-210ENST00000541639 5579 ntAPPRIS P5 TSL 1 (best) BASIC7.09□□□□□ -1.27
HTTP42858 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
HTTP42858 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
HTTP42858 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.09□□□□□ -1.28
HTTP42858 PABPC1P6-201ENST00000445594 1829 ntBASIC7.09□□□□□ -1.28
HTTP42858 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
HTTP42858 RYR1-201ENST00000355481 15377 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
HTTP42858 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.08□□□□□ -1.28
HTTP42858 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 CACNA1C-217ENST00000399641 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.08□□□□□ -1.28
HTTP42858 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 PSMD10P3-201ENST00000437000 448 ntBASIC7.08□□□□□ -1.28
HTTP42858 AC002486.2-201ENST00000447806 590 ntBASIC7.08□□□□□ -1.28
HTTP42858 SUMO2P10-201ENST00000452006 288 ntBASIC7.08□□□□□ -1.28
HTTP42858 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.08□□□□□ -1.28
HTTP42858 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.08□□□□□ -1.28
HTTP42858 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.08□□□□□ -1.28
HTTP42858 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC7.08□□□□□ -1.28
HTTP42858 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
HTTP42858 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
HTTP42858 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.08□□□□□ -1.28
HTTP42858 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC7.08□□□□□ -1.28
HTTP42858 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 SPATA31E2P-201ENST00000554414 4965 ntBASIC7.08□□□□□ -1.28
HTTP42858 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
HTTP42858 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
HTTP42858 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.08□□□□□ -1.28
HTTP42858 AC127526.2-201ENST00000426436 775 ntBASIC7.08□□□□□ -1.28
HTTP42858 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.08□□□□□ -1.28
HTTP42858 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.08□□□□□ -1.28
HTTP42858 MRPL57P1-201ENST00000621486 265 ntBASIC7.08□□□□□ -1.28
HTTP42858 PCDHA9-201ENST00000378122 6900 ntBASIC7.08□□□□□ -1.28
HTTP42858 AC106872.5-201ENST00000508856 1416 ntBASIC7.08□□□□□ -1.28
HTTP42858 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
HTTP42858 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 Z97832.2-201ENST00000605896 4261 ntBASIC7.08□□□□□ -1.28
HTTP42858 CHD3-201ENST00000330494 7328 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 MAPKBP1-201ENST00000456763 7158 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HTTP42858 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HTTP42858 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 SNORD16-201ENST00000362803 99 ntBASIC7.07□□□□□ -1.28
HTTP42858 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
HTTP42858 RBMY2KP-201ENST00000418221 992 ntBASIC7.07□□□□□ -1.28
HTTP42858 ACA64.1-201ENST00000459171 127 ntBASIC7.07□□□□□ -1.28
HTTP42858 AL672167.3-201ENST00000465951 960 ntBASIC7.07□□□□□ -1.28
HTTP42858 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.07□□□□□ -1.28
HTTP42858 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC7.07□□□□□ -1.28
HTTP42858 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.07□□□□□ -1.28
HTTP42858 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC7.07□□□□□ -1.28
HTTP42858 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.07□□□□□ -1.28
HTTP42858 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 RHBDD1-202ENST00000392062 5151 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
HTTP42858 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.07□□□□□ -1.28
HTTP42858 TMEM164-201ENST00000288381 5452 ntTSL 5 BASIC7.07□□□□□ -1.28
HTTP42858 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC7.07□□□□□ -1.28
HTTP42858 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 AC092725.2-201ENST00000567658 1389 ntBASIC7.07□□□□□ -1.28
HTTP42858 AC117409.1-201ENST00000470499 1310 ntBASIC7.07□□□□□ -1.28
HTTP42858 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 AC114755.4-201ENST00000439114 443 ntBASIC7.07□□□□□ -1.28
HTTP42858 GEMIN2P1-201ENST00000454246 752 ntBASIC7.07□□□□□ -1.28
HTTP42858 Mico1.1-201ENST00000611698 204 ntBASIC7.07□□□□□ -1.28
HTTP42858 CU639417.4-201ENST00000623928 207 ntBASIC7.07□□□□□ -1.28
HTTP42858 PTCHD1-201ENST00000379361 13714 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 MAPK10-383ENST00000642032 3390 ntBASIC7.07□□□□□ -1.28
HTTP42858 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HTTP42858 CACNA1C-210ENST00000399606 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms