RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
CACNA1C-217ENST00000399641 PELP1Q8IZL8 1130 aaKnown RBP18.21■□□□□ 0.51
CACNA1C-217ENST00000399641 MYT1Q01538 1121 aa18.11■□□□□ 0.49
CACNA1C-217ENST00000399641 EHMT2Q96KQ7 1210 aa18.06■□□□□ 0.48
CACNA1C-217ENST00000399641 ERICH6Q7L0X2 663 aa18.06■□□□□ 0.48
CACNA1C-217ENST00000399641 FAM9AQ8IZU1 332 aaPredicted RBP17.93■□□□□ 0.46
CACNA1C-217ENST00000399641 SUPT5HO00267 1087 aaKnown RBP17.52■□□□□ 0.4
CACNA1C-217ENST00000399641 TTBK1Q5TCY1 1321 aaPredicted RBP17.43■□□□□ 0.38
CACNA1C-217ENST00000399641 APLP2Q06481 763 aa17.38■□□□□ 0.37
CACNA1C-217ENST00000399641 CCER1Q8TC90 406 aaPredicted RBP17.38■□□□□ 0.37
CACNA1C-217ENST00000399641 SHROOM4Q9ULL8 1493 aa17.19■□□□□ 0.34
CACNA1C-217ENST00000399641 ATP1B4Q9UN42 357 aaPredicted RBP17.16■□□□□ 0.34
CACNA1C-217ENST00000399641 MYT1LQ9UL68 1186 aa17.08■□□□□ 0.33
CACNA1C-217ENST00000399641 RANGAP1P46060 587 aaPredicted RBP17.05■□□□□ 0.32
CACNA1C-217ENST00000399641 YTHDC1Q96MU7 727 aaKnown RBP17.03■□□□□ 0.32
CACNA1C-217ENST00000399641 DAXXQ9UER7 740 aaPredicted RBP16.92■□□□□ 0.3
CACNA1C-217ENST00000399641 NISCHQ9Y2I1 1504 aa16.85■□□□□ 0.29
CACNA1C-217ENST00000399641 NEFLP07196 543 aa16.83■□□□□ 0.28
CACNA1C-217ENST00000399641 PCGF6Q9BYE7 350 aa16.81■□□□□ 0.28
CACNA1C-217ENST00000399641 CENPBP07199 599 aaPredicted RBP16.78■□□□□ 0.28
CACNA1C-217ENST00000399641 CHIC1Q5VXU3 224 aa16.75■□□□□ 0.27
CACNA1C-217ENST00000399641 CNGB1Q14028 1251 aaPredicted RBP16.72■□□□□ 0.27
CACNA1C-217ENST00000399641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
CACNA1C-217ENST00000399641 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
CACNA1C-217ENST00000399641 POLR3GLQ9BT43 218 aa16.63■□□□□ 0.25
CACNA1C-217ENST00000399641 ZNF316A6NFI3 1004 aaPredicted RBP16.5■□□□□ 0.23
CACNA1C-217ENST00000399641 SLC4A1APQ9BWU0 796 aaKnown RBP16.46■□□□□ 0.23
CACNA1C-217ENST00000399641 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
CACNA1C-217ENST00000399641 UBTFP17480 764 aaKnown RBP16.4■□□□□ 0.22
CACNA1C-217ENST00000399641 CLSPNQ9HAW4 1339 aa16.38■□□□□ 0.21
CACNA1C-217ENST00000399641 RTL5Q5HYW3 569 aaPredicted RBP16.33■□□□□ 0.2
CACNA1C-217ENST00000399641 TRIM41Q8WV44 630 aa16.2■□□□□ 0.18
CACNA1C-217ENST00000399641 SLC24A1O60721 1099 aa16.18■□□□□ 0.18
CACNA1C-217ENST00000399641 PPARGC1BQ86YN6 1023 aaKnown RBP16.13■□□□□ 0.17
CACNA1C-217ENST00000399641 BCANQ96GW7 911 aa16.13■□□□□ 0.17
CACNA1C-217ENST00000399641 FBLN2P98095 1184 aa16.08■□□□□ 0.16
CACNA1C-217ENST00000399641 PLPPR3Q6T4P5 718 aa16.07■□□□□ 0.16
CACNA1C-217ENST00000399641 EIF5BO60841 1220 aaKnown RBP16.05■□□□□ 0.16
CACNA1C-217ENST00000399641 ITGAEP38570 1179 aa15.99■□□□□ 0.15
CACNA1C-217ENST00000399641 ESF1Q9H501 851 aaKnown RBP15.94■□□□□ 0.14
CACNA1C-217ENST00000399641 ZBTB47Q9UFB7 747 aaPredicted RBP15.85■□□□□ 0.13
CACNA1C-217ENST00000399641 ZEB1P37275 1124 aaPredicted RBP15.84■□□□□ 0.13
CACNA1C-217ENST00000399641 PABPN1Q86U42 306 aaKnown RBP eCLIP15.79■□□□□ 0.12
CACNA1C-217ENST00000399641 ARXQ96QS3 562 aa15.74■□□□□ 0.11
CACNA1C-217ENST00000399641 TULP1O00294 542 aaPredicted RBP15.7■□□□□ 0.1
CACNA1C-217ENST00000399641 NPM1P06748 294 aaKnown RBP eCLIP15.69■□□□□ 0.1
CACNA1C-217ENST00000399641 NPM2Q86SE8 214 aaKnown RBP15.69■□□□□ 0.1
CACNA1C-217ENST00000399641 NCBP3Q53F19 620 aaKnown RBP15.68■□□□□ 0.1
CACNA1C-217ENST00000399641 CANXP27824 592 aaKnown RBP15.65■□□□□ 0.1
CACNA1C-217ENST00000399641 STAG3Q9UJ98 1225 aa15.65■□□□□ 0.1
CACNA1C-217ENST00000399641 A0A0G2JS52 829 aa15.63■□□□□ 0.09
CACNA1C-217ENST00000399641 AMER1Q5JTC6 1135 aaPredicted RBP15.63■□□□□ 0.09
CACNA1C-217ENST00000399641 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
CACNA1C-217ENST00000399641 TRIM52Q96A61 297 aa15.62■□□□□ 0.09
CACNA1C-217ENST00000399641 ABCC9O60706 1549 aa15.6■□□□□ 0.09
CACNA1C-217ENST00000399641 CDK11BP21127 795 aaKnown RBP15.56■□□□□ 0.08
CACNA1C-217ENST00000399641 CDK11AQ9UQ88 783 aaPredicted RBP15.56■□□□□ 0.08
CACNA1C-217ENST00000399641 FAM50AQ14320 339 aaKnown RBP15.53■□□□□ 0.08
CACNA1C-217ENST00000399641 NEFMP07197 916 aa15.53■□□□□ 0.08
CACNA1C-217ENST00000399641 ANP32BQ92688 251 aaKnown RBP15.52■□□□□ 0.08
CACNA1C-217ENST00000399641 GLIPR1L2Q4G1C9 344 aa15.5■□□□□ 0.07
CACNA1C-217ENST00000399641 ZNF326Q5BKZ1 582 aaKnown RBP15.48■□□□□ 0.07
CACNA1C-217ENST00000399641 ARID3CA6NKF2 412 aa15.48■□□□□ 0.07
CACNA1C-217ENST00000399641 HSP90AA1P07900 732 aaKnown RBP15.45■□□□□ 0.06
CACNA1C-217ENST00000399641 CHGAP10645 457 aaKnown RBP15.43■□□□□ 0.06
CACNA1C-217ENST00000399641 TPRNQ4KMQ1 711 aa15.37■□□□□ 0.05
CACNA1C-217ENST00000399641 ZNF777Q9ULD5 760 aaPredicted RBP15.37■□□□□ 0.05
CACNA1C-217ENST00000399641 PLEKHG5O94827 1062 aa15.35■□□□□ 0.05
CACNA1C-217ENST00000399641 TRHP20396 242 aaPredicted RBP15.35■□□□□ 0.05
CACNA1C-217ENST00000399641 C14orf37Q86TY3 774 aa15.34■□□□□ 0.05
CACNA1C-217ENST00000399641 HAP1P54257 671 aaPredicted RBP15.34■□□□□ 0.05
CACNA1C-217ENST00000399641 NBR1Q14596 966 aa15.33■□□□□ 0.04
CACNA1C-217ENST00000399641 NEUROD1Q13562 356 aa15.31■□□□□ 0.04
CACNA1C-217ENST00000399641 HRCP23327 699 aa15.3■□□□□ 0.04
CACNA1C-217ENST00000399641 ANP32AP39687 249 aaKnown RBP15.3■□□□□ 0.04
CACNA1C-217ENST00000399641 ZBTB7CA1YPR0 619 aa15.29■□□□□ 0.04
CACNA1C-217ENST00000399641 ARID4BQ4LE39 1312 aaPredicted RBP15.28■□□□□ 0.04
CACNA1C-217ENST00000399641 TAOK2Q9UL54 1235 aa15.26■□□□□ 0.03
CACNA1C-217ENST00000399641 SENP3Q9H4L4 574 aaPredicted RBP15.24■□□□□ 0.03
CACNA1C-217ENST00000399641 P3H3Q8IVL6 736 aa15.2■□□□□ 0.02
CACNA1C-217ENST00000399641 GTF3C3Q9Y5Q9 886 aa15.19■□□□□ 0.02
CACNA1C-217ENST00000399641 AEBP2Q6ZN18 517 aaPredicted RBP15.17■□□□□ 0.02
CACNA1C-217ENST00000399641 TRIM26Q12899 539 aaPredicted RBP15.17■□□□□ 0.02
CACNA1C-217ENST00000399641 DIEXFQ68CQ4 756 aaKnown RBP15.14■□□□□ 0.01
CACNA1C-217ENST00000399641 PRM3Q9NNZ6 103 aa15.12■□□□□ 0.01
CACNA1C-217ENST00000399641 CLSTN1O94985 981 aa15.1■□□□□ 0.01
CACNA1C-217ENST00000399641 PPP1R15AO75807 674 aaPredicted RBP15.09■□□□□ 0.01
CACNA1C-217ENST00000399641 NPHP1O15259 732 aa15.07■□□□□ 0
CACNA1C-217ENST00000399641 SALL2Q9Y467 1007 aaPredicted RBP15.07■□□□□ 0
CACNA1C-217ENST00000399641 ANP32CO43423 234 aa15.04■□□□□ -0
CACNA1C-217ENST00000399641 TNNT2P45379 298 aaPredicted RBP15.04■□□□□ -0
CACNA1C-217ENST00000399641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.03■□□□□ -0
CACNA1C-217ENST00000399641 FBXO3Q9UK99 471 aa15.03■□□□□ -0
CACNA1C-217ENST00000399641 CHMP7Q8WUX9 453 aaPredicted RBP15.02□□□□□ -0.01
CACNA1C-217ENST00000399641 DNTTIP2Q5QJE6 756 aaKnown RBP15□□□□□ -0.01
CACNA1C-217ENST00000399641 UPF2Q9HAU5 1272 aaKnown RBP15□□□□□ -0.01
CACNA1C-217ENST00000399641 NCLP19338 710 aaKnown RBP15□□□□□ -0.01
CACNA1C-217ENST00000399641 RTN4Q9NQC3 1192 aaKnown RBP14.98□□□□□ -0.01
CACNA1C-217ENST00000399641 ANO8Q9HCE9 1232 aaPredicted RBP14.97□□□□□ -0.01
CACNA1C-217ENST00000399641 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms