RNA–Protein interactions for RNA: ENST00000299642.8

CLEC3A-201, Transcript of C-type lectin domain family 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLEC3A, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLEC3A-201ENST00000299642 AEBP2Q6ZN18 517 aaPredicted RBP16.44■□□□□ 0.22
CLEC3A-201ENST00000299642 POTEDQ86YR6 584 aa15.53■□□□□ 0.08
CLEC3A-201ENST00000299642 CHIC1Q5VXU3 224 aa15.3■□□□□ 0.04
CLEC3A-201ENST00000299642 NISCHQ9Y2I1 1504 aa15.05■□□□□ -0
CLEC3A-201ENST00000299642 SENP3Q9H4L4 574 aaPredicted RBP14.05□□□□□ -0.16
CLEC3A-201ENST00000299642 PHF23Q9BUL5 403 aaPredicted RBP13.83□□□□□ -0.2
CLEC3A-201ENST00000299642 FOXD1Q16676 465 aa13.2□□□□□ -0.3
CLEC3A-201ENST00000299642 SHROOM4Q9ULL8 1493 aa12.9□□□□□ -0.34
CLEC3A-201ENST00000299642 ZCCHC6Q5VYS8 1495 aaKnown RBP12.78□□□□□ -0.36
CLEC3A-201ENST00000299642 CCDC180Q9P1Z9 1646 aa12.74□□□□□ -0.37
CLEC3A-201ENST00000299642 SUPT5HO00267 1087 aaKnown RBP12.63□□□□□ -0.39
CLEC3A-201ENST00000299642 MSH5O43196 834 aa12.5□□□□□ -0.41
CLEC3A-201ENST00000299642 MYO15BQ96JP2 1530 aa12.46□□□□□ -0.42
CLEC3A-201ENST00000299642 DCAF8L2P0C7V8 631 aa12.35□□□□□ -0.43
CLEC3A-201ENST00000299642 DCAF1Q9Y4B6 1507 aa12.33□□□□□ -0.44
CLEC3A-201ENST00000299642 PIAS4Q8N2W9 510 aaPredicted RBP12.22□□□□□ -0.45
CLEC3A-201ENST00000299642 HRCP23327 699 aa12.12□□□□□ -0.47
CLEC3A-201ENST00000299642 ABCC9O60706 1549 aa12.09□□□□□ -0.47
CLEC3A-201ENST00000299642 PCGF6Q9BYE7 350 aa12.03□□□□□ -0.48
CLEC3A-201ENST00000299642 LOC105371045A0A1W2PR82 267 aa12.01□□□□□ -0.49
CLEC3A-201ENST00000299642 SCRIBQ14160 1630 aa12□□□□□ -0.49
CLEC3A-201ENST00000299642 PPP6R1Q9UPN7 881 aa11.97□□□□□ -0.49
CLEC3A-201ENST00000299642 RSF1Q96T23 1441 aaPredicted RBP11.95□□□□□ -0.5
CLEC3A-201ENST00000299642 PPARGC1BQ86YN6 1023 aaKnown RBP11.92□□□□□ -0.5
CLEC3A-201ENST00000299642 ADRA2BP18089 450 aa11.91□□□□□ -0.5
CLEC3A-201ENST00000299642 RB1CC1Q8TDY2 1594 aa11.88□□□□□ -0.51
CLEC3A-201ENST00000299642 CACNB1Q02641 598 aaPredicted RBP11.83□□□□□ -0.52
CLEC3A-201ENST00000299642 POTEHQ6S545 545 aa11.8□□□□□ -0.52
CLEC3A-201ENST00000299642 PLPPR3Q6T4P5 718 aa11.79□□□□□ -0.52
CLEC3A-201ENST00000299642 CECR2Q9BXF3 1484 aa11.78□□□□□ -0.52
CLEC3A-201ENST00000299642 TRIM26Q12899 539 aaPredicted RBP11.76□□□□□ -0.53
CLEC3A-201ENST00000299642 MROH2BQ7Z745 1585 aa11.74□□□□□ -0.53
CLEC3A-201ENST00000299642 NACADO15069 1562 aa11.73□□□□□ -0.53
CLEC3A-201ENST00000299642 TRIM41Q8WV44 630 aa11.72□□□□□ -0.53
CLEC3A-201ENST00000299642 WIZO95785 1651 aa11.69□□□□□ -0.54
CLEC3A-201ENST00000299642 FAM9AQ8IZU1 332 aaPredicted RBP11.68□□□□□ -0.54
CLEC3A-201ENST00000299642 EIF4G1Q04637 1599 aaKnown RBP11.63□□□□□ -0.55
CLEC3A-201ENST00000299642 BAZ1AQ9NRL2 1556 aaPredicted RBP11.61□□□□□ -0.55
CLEC3A-201ENST00000299642 EHMT2Q96KQ7 1210 aa11.6□□□□□ -0.55
CLEC3A-201ENST00000299642 TOP2AP11388 1531 aaKnown RBP11.48□□□□□ -0.57
CLEC3A-201ENST00000299642 ZEB1P37275 1124 aaPredicted RBP11.48□□□□□ -0.57
CLEC3A-201ENST00000299642 ABCC8Q09428 1581 aa11.46□□□□□ -0.57
CLEC3A-201ENST00000299642 SMARCA4P51532 1647 aa11.46□□□□□ -0.58
CLEC3A-201ENST00000299642 SMARCA2P51531 1590 aa11.44□□□□□ -0.58
CLEC3A-201ENST00000299642 UNC13AQ9UPW8 1703 aa11.44□□□□□ -0.58
CLEC3A-201ENST00000299642 CCDC88BA6NC98 1476 aa11.43□□□□□ -0.58
CLEC3A-201ENST00000299642 SOGA1O94964 1423 aa11.35□□□□□ -0.59
CLEC3A-201ENST00000299642 RUSC2Q8N2Y8 1516 aa11.32□□□□□ -0.6
CLEC3A-201ENST00000299642 WRNQ14191 1432 aaPredicted RBP eCLIP11.32□□□□□ -0.6
CLEC3A-201ENST00000299642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.32□□□□□ -0.6
CLEC3A-201ENST00000299642 CEP162Q5TB80 1403 aa11.31□□□□□ -0.6
CLEC3A-201ENST00000299642 BICRAQ9NZM4 1560 aa11.3□□□□□ -0.6
CLEC3A-201ENST00000299642 TNIKQ9UKE5 1360 aa11.26□□□□□ -0.61
CLEC3A-201ENST00000299642 SCAF1Q9H7N4 1312 aaKnown RBP11.26□□□□□ -0.61
CLEC3A-201ENST00000299642 TTBK1Q5TCY1 1321 aaPredicted RBP11.25□□□□□ -0.61
CLEC3A-201ENST00000299642 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
CLEC3A-201ENST00000299642 CCER1Q8TC90 406 aaPredicted RBP11.23□□□□□ -0.61
CLEC3A-201ENST00000299642 PEG3Q9GZU2 1588 aa11.23□□□□□ -0.61
CLEC3A-201ENST00000299642 EEA1Q15075 1411 aa11.22□□□□□ -0.61
CLEC3A-201ENST00000299642 SYNJ1O43426 1573 aa11.21□□□□□ -0.61
CLEC3A-201ENST00000299642 CSRNP3Q8WYN3 585 aa11.21□□□□□ -0.62
CLEC3A-201ENST00000299642 GOLGA3Q08378 1498 aa11.19□□□□□ -0.62
CLEC3A-201ENST00000299642 UBTFP17480 764 aaKnown RBP11.14□□□□□ -0.63
CLEC3A-201ENST00000299642 KIF21BO75037 1637 aa11.13□□□□□ -0.63
CLEC3A-201ENST00000299642 ATAD2BQ9ULI0 1458 aa11.13□□□□□ -0.63
CLEC3A-201ENST00000299642 MAPK8IP2Q13387 824 aaPredicted RBP11.11□□□□□ -0.63
CLEC3A-201ENST00000299642 CEP164Q9UPV0 1460 aa11.1□□□□□ -0.63
CLEC3A-201ENST00000299642 NEUROD1Q13562 356 aa11.08□□□□□ -0.64
CLEC3A-201ENST00000299642 BAZ1BQ9UIG0 1483 aaKnown RBP11.08□□□□□ -0.64
CLEC3A-201ENST00000299642 DIEXFQ68CQ4 756 aaKnown RBP11.07□□□□□ -0.64
CLEC3A-201ENST00000299642 ACIN1Q9UKV3 1341 aaKnown RBP11.07□□□□□ -0.64
CLEC3A-201ENST00000299642 RAPGEF2Q9Y4G8 1499 aa11.07□□□□□ -0.64
CLEC3A-201ENST00000299642 DMRT2Q9Y5R5 561 aa11.07□□□□□ -0.64
CLEC3A-201ENST00000299642 CLIP1P30622 1438 aa11.06□□□□□ -0.64
CLEC3A-201ENST00000299642 VPS8Q8N3P4 1428 aa11.04□□□□□ -0.64
CLEC3A-201ENST00000299642 TOP2BQ02880 1626 aa11.02□□□□□ -0.65
CLEC3A-201ENST00000299642 BIVM-ERCC5R4GMW8 1640 aa11□□□□□ -0.65
CLEC3A-201ENST00000299642 HNRNPUL2Q1KMD3 747 aaKnown RBP10.99□□□□□ -0.65
CLEC3A-201ENST00000299642 ZNF316A6NFI3 1004 aaPredicted RBP10.97□□□□□ -0.65
CLEC3A-201ENST00000299642 PELP1Q8IZL8 1130 aaKnown RBP10.96□□□□□ -0.66
CLEC3A-201ENST00000299642 ARAP1Q96P48 1450 aa10.95□□□□□ -0.66
CLEC3A-201ENST00000299642 RANGAP1P46060 587 aaPredicted RBP10.94□□□□□ -0.66
CLEC3A-201ENST00000299642 PRXQ9BXM0 1461 aa10.94□□□□□ -0.66
CLEC3A-201ENST00000299642 GTF3C3Q9Y5Q9 886 aa10.94□□□□□ -0.66
CLEC3A-201ENST00000299642 CUX1P39880 1505 aa10.92□□□□□ -0.66
CLEC3A-201ENST00000299642 ERICH3Q5RHP9 1530 aa10.92□□□□□ -0.66
CLEC3A-201ENST00000299642 CENPBP07199 599 aaPredicted RBP10.9□□□□□ -0.66
CLEC3A-201ENST00000299642 HMGXB3Q12766 1538 aa10.89□□□□□ -0.67
CLEC3A-201ENST00000299642 MIER1Q8N108 512 aa10.87□□□□□ -0.67
CLEC3A-201ENST00000299642 NCAPD3P42695 1498 aa10.87□□□□□ -0.67
CLEC3A-201ENST00000299642 KANK4Q5T7N3 995 aaPredicted RBP10.86□□□□□ -0.67
CLEC3A-201ENST00000299642 DHX57Q6P158 1386 aaKnown RBP10.85□□□□□ -0.67
CLEC3A-201ENST00000299642 APLP2Q06481 763 aa10.85□□□□□ -0.67
CLEC3A-201ENST00000299642 YTHDC1Q96MU7 727 aaKnown RBP10.84□□□□□ -0.67
CLEC3A-201ENST00000299642 CFTRP13569 1480 aa10.82□□□□□ -0.68
CLEC3A-201ENST00000299642 ARHGAP35Q9NRY4 1499 aa10.81□□□□□ -0.68
CLEC3A-201ENST00000299642 KIF27Q86VH2 1401 aa10.81□□□□□ -0.68
CLEC3A-201ENST00000299642 RRBP1Q9P2E9 1410 aaKnown RBP10.81□□□□□ -0.68
CLEC3A-201ENST00000299642 CUX2O14529 1486 aa10.77□□□□□ -0.69
CLEC3A-201ENST00000299642 PRDM2Q13029 1718 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms