Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC7.92□□□□□ -1.14
COL4A5P29400 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
COL4A5P29400 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC7.92□□□□□ -1.14
COL4A5P29400 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC7.92□□□□□ -1.14
COL4A5P29400 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL4A5P29400 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.92□□□□□ -1.14
COL4A5P29400 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.92□□□□□ -1.14
COL4A5P29400 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL4A5P29400 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC7.92□□□□□ -1.14
COL4A5P29400 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.92□□□□□ -1.14
COL4A5P29400 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.92□□□□□ -1.14
COL4A5P29400 SUGT1P2-201ENST00000379452 992 ntBASIC7.92□□□□□ -1.14
COL4A5P29400 CRYGGP-201ENST00000443337 145 ntBASIC7.92□□□□□ -1.14
COL4A5P29400 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.92□□□□□ -1.14
COL4A5P29400 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.92□□□□□ -1.14
COL4A5P29400 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
COL4A5P29400 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.92□□□□□ -1.14
COL4A5P29400 AC068768.2-201ENST00000602352 343 ntBASIC7.92□□□□□ -1.14
COL4A5P29400 AP005431.1-201ENST00000618479 319 ntBASIC7.92□□□□□ -1.14
COL4A5P29400 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
COL4A5P29400 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
COL4A5P29400 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
COL4A5P29400 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL4A5P29400 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL4A5P29400 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
COL4A5P29400 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 LPAL2-203ENST00000454031 2498 ntBASIC7.91□□□□□ -1.14
COL4A5P29400 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
COL4A5P29400 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
COL4A5P29400 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC7.91□□□□□ -1.14
COL4A5P29400 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.91□□□□□ -1.14
COL4A5P29400 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 AL590240.2-201ENST00000413370 894 ntBASIC7.91□□□□□ -1.14
COL4A5P29400 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.91□□□□□ -1.14
COL4A5P29400 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.91□□□□□ -1.14
COL4A5P29400 RN7SL870P-201ENST00000460111 296 ntBASIC7.91□□□□□ -1.14
COL4A5P29400 RN7SL369P-201ENST00000477138 299 ntBASIC7.91□□□□□ -1.14
COL4A5P29400 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC7.91□□□□□ -1.14
COL4A5P29400 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.91□□□□□ -1.14
COL4A5P29400 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.91□□□□□ -1.14
COL4A5P29400 SNORA70D-201ENST00000578836 135 ntBASIC7.91□□□□□ -1.14
COL4A5P29400 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.91□□□□□ -1.14
COL4A5P29400 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.91□□□□□ -1.14
COL4A5P29400 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
COL4A5P29400 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 AF121897.1-201ENST00000411867 3980 ntBASIC7.91□□□□□ -1.14
COL4A5P29400 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 AC027575.3-201ENST00000583058 2747 ntBASIC7.91□□□□□ -1.14
COL4A5P29400 AC087392.3-202ENST00000358446 1754 ntBASIC7.91□□□□□ -1.14
COL4A5P29400 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.91□□□□□ -1.14
COL4A5P29400 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC7.91□□□□□ -1.14
COL4A5P29400 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
COL4A5P29400 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL4A5P29400 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.91□□□□□ -1.14
COL4A5P29400 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
COL4A5P29400 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
COL4A5P29400 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
COL4A5P29400 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
COL4A5P29400 AL359396.1-201ENST00000623151 2376 ntBASIC7.9□□□□□ -1.14
COL4A5P29400 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.9□□□□□ -1.14
COL4A5P29400 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
COL4A5P29400 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.9□□□□□ -1.14
COL4A5P29400 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
COL4A5P29400 RPL23AP85-201ENST00000421838 433 ntBASIC7.9□□□□□ -1.14
COL4A5P29400 EMC3-AS1-205ENST00000438698 534 ntBASIC7.9□□□□□ -1.14
COL4A5P29400 PPIAP7-201ENST00000454070 489 ntBASIC7.9□□□□□ -1.14
COL4A5P29400 RN7SL273P-201ENST00000481561 299 ntBASIC7.9□□□□□ -1.14
COL4A5P29400 PPIAP19-201ENST00000486414 492 ntBASIC7.9□□□□□ -1.14
COL4A5P29400 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
COL4A5P29400 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.9□□□□□ -1.14
COL4A5P29400 AP000620.1-201ENST00000527147 504 ntBASIC7.9□□□□□ -1.14
COL4A5P29400 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.9□□□□□ -1.14
COL4A5P29400 AC007346.1-201ENST00000569208 867 ntBASIC7.9□□□□□ -1.14
COL4A5P29400 AC087575.1-201ENST00000585087 229 ntBASIC7.9□□□□□ -1.14
COL4A5P29400 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.9□□□□□ -1.14
COL4A5P29400 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.9□□□□□ -1.14
COL4A5P29400 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
COL4A5P29400 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.9□□□□□ -1.14
COL4A5P29400 AC104837.1-201ENST00000444644 1587 ntBASIC7.9□□□□□ -1.14
COL4A5P29400 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
COL4A5P29400 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
COL4A5P29400 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
COL4A5P29400 AL596244.1-201ENST00000567068 3779 ntBASIC7.9□□□□□ -1.15
COL4A5P29400 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
COL4A5P29400 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
COL4A5P29400 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
COL4A5P29400 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
COL4A5P29400 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.15
COL4A5P29400 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms