RNA–Protein interactions for RNA: ENST00000349215.7

HPS5-201, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS5, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-201ENST00000349215 NISCHQ9Y2I1 1504 aa15.28■□□□□ 0.04
HPS5-201ENST00000349215 DCAF8L2P0C7V8 631 aa15.05■□□□□ 0
HPS5-201ENST00000349215 SUPT5HO00267 1087 aaKnown RBP13.89□□□□□ -0.19
HPS5-201ENST00000349215 CCDC180Q9P1Z9 1646 aa13.84□□□□□ -0.19
HPS5-201ENST00000349215 SHROOM4Q9ULL8 1493 aa13.83□□□□□ -0.2
HPS5-201ENST00000349215 FAM9AQ8IZU1 332 aaPredicted RBP13.36□□□□□ -0.27
HPS5-201ENST00000349215 ABCC9O60706 1549 aa13.28□□□□□ -0.28
HPS5-201ENST00000349215 APLP2Q06481 763 aa13.16□□□□□ -0.3
HPS5-201ENST00000349215 EHMT2Q96KQ7 1210 aa13.07□□□□□ -0.32
HPS5-201ENST00000349215 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
HPS5-201ENST00000349215 MYO15BQ96JP2 1530 aa13□□□□□ -0.33
HPS5-201ENST00000349215 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
HPS5-201ENST00000349215 DCAF1Q9Y4B6 1507 aa12.92□□□□□ -0.34
HPS5-201ENST00000349215 UNC13AQ9UPW8 1703 aa12.86□□□□□ -0.35
HPS5-201ENST00000349215 UBTFP17480 764 aaKnown RBP12.83□□□□□ -0.36
HPS5-201ENST00000349215 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.37
HPS5-201ENST00000349215 RANGAP1P46060 587 aaPredicted RBP12.77□□□□□ -0.37
HPS5-201ENST00000349215 ZCCHC6Q5VYS8 1495 aaKnown RBP12.65□□□□□ -0.38
HPS5-201ENST00000349215 RB1CC1Q8TDY2 1594 aa12.58□□□□□ -0.4
HPS5-201ENST00000349215 SCRIBQ14160 1630 aa12.56□□□□□ -0.4
HPS5-201ENST00000349215 TTBK1Q5TCY1 1321 aaPredicted RBP12.55□□□□□ -0.4
HPS5-201ENST00000349215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.53□□□□□ -0.4
HPS5-201ENST00000349215 HNRNPUL2Q1KMD3 747 aaKnown RBP12.53□□□□□ -0.4
HPS5-201ENST00000349215 NACADO15069 1562 aa12.5□□□□□ -0.41
HPS5-201ENST00000349215 CHIC1Q5VXU3 224 aa12.46□□□□□ -0.41
HPS5-201ENST00000349215 BICRAQ9NZM4 1560 aa12.42□□□□□ -0.42
HPS5-201ENST00000349215 MYT1LQ9UL68 1186 aa12.42□□□□□ -0.42
HPS5-201ENST00000349215 FBLN2P98095 1184 aa12.37□□□□□ -0.43
HPS5-201ENST00000349215 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
HPS5-201ENST00000349215 ZEB1P37275 1124 aaPredicted RBP12.3□□□□□ -0.44
HPS5-201ENST00000349215 CCER1Q8TC90 406 aaPredicted RBP12.29□□□□□ -0.44
HPS5-201ENST00000349215 LOC105371045A0A1W2PR82 267 aa12.21□□□□□ -0.45
HPS5-201ENST00000349215 CSRNP3Q8WYN3 585 aa12.2□□□□□ -0.46
HPS5-201ENST00000349215 ITGAEP38570 1179 aa12.17□□□□□ -0.46
HPS5-201ENST00000349215 PPARGC1BQ86YN6 1023 aaKnown RBP12.15□□□□□ -0.46
HPS5-201ENST00000349215 TRIM26Q12899 539 aaPredicted RBP12.14□□□□□ -0.47
HPS5-201ENST00000349215 NPM1P06748 294 aaKnown RBP eCLIP12.13□□□□□ -0.471e-9■■■■■ 69
HPS5-201ENST00000349215 CDK11AQ9UQ88 783 aaPredicted RBP12.13□□□□□ -0.47
HPS5-201ENST00000349215 BAZ1BQ9UIG0 1483 aaKnown RBP12.11□□□□□ -0.47
HPS5-201ENST00000349215 PELP1Q8IZL8 1130 aaKnown RBP12.08□□□□□ -0.48
HPS5-201ENST00000349215 PEG3Q9GZU2 1588 aa12.06□□□□□ -0.48
HPS5-201ENST00000349215 RSF1Q96T23 1441 aaPredicted RBP12.06□□□□□ -0.48
HPS5-201ENST00000349215 CHMP7Q8WUX9 453 aaPredicted RBP12.06□□□□□ -0.48
HPS5-201ENST00000349215 BAZ1AQ9NRL2 1556 aaPredicted RBP12.05□□□□□ -0.48
HPS5-201ENST00000349215 FAM50AQ14320 339 aaKnown RBP12.04□□□□□ -0.48
HPS5-201ENST00000349215 P3H3Q8IVL6 736 aa12.01□□□□□ -0.49
HPS5-201ENST00000349215 ERCC6Q03468 1493 aa11.98□□□□□ -0.49
HPS5-201ENST00000349215 TRIM52Q96A61 297 aa11.95□□□□□ -0.5
HPS5-201ENST00000349215 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
HPS5-201ENST00000349215 ARID3CA6NKF2 412 aa11.9□□□□□ -0.51
HPS5-201ENST00000349215 CECR2Q9BXF3 1484 aa11.89□□□□□ -0.51
HPS5-201ENST00000349215 SMARCA2P51531 1590 aa11.89□□□□□ -0.51
HPS5-201ENST00000349215 EEA1Q15075 1411 aa11.87□□□□□ -0.51
HPS5-201ENST00000349215 WRNQ14191 1432 aaPredicted RBP eCLIP11.87□□□□□ -0.51
HPS5-201ENST00000349215 PDS5BQ9NTI5 1447 aa11.87□□□□□ -0.51
HPS5-201ENST00000349215 ZNF777Q9ULD5 760 aaPredicted RBP11.86□□□□□ -0.51
HPS5-201ENST00000349215 POLR3GLQ9BT43 218 aa11.84□□□□□ -0.51
HPS5-201ENST00000349215 KIF27Q86VH2 1401 aa11.83□□□□□ -0.52
HPS5-201ENST00000349215 CENPBP07199 599 aaPredicted RBP11.83□□□□□ -0.52
HPS5-201ENST00000349215 PRDM2Q13029 1718 aa11.8□□□□□ -0.52
HPS5-201ENST00000349215 PLEKHD1A6NEE1 506 aa11.77□□□□□ -0.53
HPS5-201ENST00000349215 SLC4A1APQ9BWU0 796 aaKnown RBP11.76□□□□□ -0.53
HPS5-201ENST00000349215 TSPY4P0CV99 314 aa11.76□□□□□ -0.53
HPS5-201ENST00000349215 TSPY10P0CW01 314 aa11.76□□□□□ -0.53
HPS5-201ENST00000349215 BCANQ96GW7 911 aa11.74□□□□□ -0.53
HPS5-201ENST00000349215 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
HPS5-201ENST00000349215 MROH2BQ7Z745 1585 aa11.73□□□□□ -0.53
HPS5-201ENST00000349215 MTUS2Q5JR59 1369 aa11.73□□□□□ -0.53
HPS5-201ENST00000349215 EIF4G1Q04637 1599 aaKnown RBP11.71□□□□□ -0.53
HPS5-201ENST00000349215 NEFLP07196 543 aa11.7□□□□□ -0.54
HPS5-201ENST00000349215 ATAD2BQ9ULI0 1458 aa11.69□□□□□ -0.54
HPS5-201ENST00000349215 NEUROD1Q13562 356 aa11.69□□□□□ -0.54
HPS5-201ENST00000349215 STAG3Q9UJ98 1225 aa11.69□□□□□ -0.54
HPS5-201ENST00000349215 CLIP1P30622 1438 aa11.68□□□□□ -0.54
HPS5-201ENST00000349215 KCNH8Q96L42 1107 aa11.67□□□□□ -0.54
HPS5-201ENST00000349215 SMARCA4P51532 1647 aa11.66□□□□□ -0.54
HPS5-201ENST00000349215 GOLGA3Q08378 1498 aa11.66□□□□□ -0.54
HPS5-201ENST00000349215 CCDC88BA6NC98 1476 aa11.66□□□□□ -0.54
HPS5-201ENST00000349215 ACIN1Q9UKV3 1341 aaKnown RBP11.66□□□□□ -0.54
HPS5-201ENST00000349215 ZNF326Q5BKZ1 582 aaKnown RBP11.65□□□□□ -0.54
HPS5-201ENST00000349215 CARMIL1Q5VZK9 1371 aa11.65□□□□□ -0.55
HPS5-201ENST00000349215 CUX2O14529 1486 aa11.64□□□□□ -0.55
HPS5-201ENST00000349215 CEP164Q9UPV0 1460 aa11.64□□□□□ -0.55
HPS5-201ENST00000349215 SOGA1O94964 1423 aa11.63□□□□□ -0.55
HPS5-201ENST00000349215 HMGXB3Q12766 1538 aa11.63□□□□□ -0.55
HPS5-201ENST00000349215 HRCP23327 699 aa11.61□□□□□ -0.55
HPS5-201ENST00000349215 TOP2AP11388 1531 aaKnown RBP11.6□□□□□ -0.55
HPS5-201ENST00000349215 CHGAP10645 457 aaKnown RBP11.6□□□□□ -0.55
HPS5-201ENST00000349215 ABCC8Q09428 1581 aa11.58□□□□□ -0.56
HPS5-201ENST00000349215 CARMIL2Q6F5E8 1435 aa11.57□□□□□ -0.56
HPS5-201ENST00000349215 TNIKQ9UKE5 1360 aa11.57□□□□□ -0.56
HPS5-201ENST00000349215 CFDP1Q9UEE9 299 aaPredicted RBP11.56□□□□□ -0.56
HPS5-201ENST00000349215 CNGB1Q14028 1251 aaPredicted RBP11.56□□□□□ -0.56
HPS5-201ENST00000349215 TDRD9Q8NDG6 1382 aaKnown RBP11.56□□□□□ -0.56
HPS5-201ENST00000349215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.56□□□□□ -0.56
HPS5-201ENST00000349215 NCAPD3P42695 1498 aa11.56□□□□□ -0.56
HPS5-201ENST00000349215 CHIC2Q9UKJ5 165 aa11.55□□□□□ -0.56
HPS5-201ENST00000349215 TRHP20396 242 aaPredicted RBP11.54□□□□□ -0.56
HPS5-201ENST00000349215 PLPPR3Q6T4P5 718 aa11.54□□□□□ -0.56
HPS5-201ENST00000349215 FHAD1B1AJZ9 1412 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms