RNA–Protein interactions for RNA: ENST00000444129.6

RECQL-204, Transcript of RecQ like helicase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RECQL, Length 3,702 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL-204ENST00000444129 NISCHQ9Y2I1 1504 aa14.75□□□□□ -0.05
RECQL-204ENST00000444129 DCAF8L2P0C7V8 631 aa14.52□□□□□ -0.08
RECQL-204ENST00000444129 SHROOM4Q9ULL8 1493 aa13.82□□□□□ -0.2
RECQL-204ENST00000444129 SUPT5HO00267 1087 aaKnown RBP13.73□□□□□ -0.21
RECQL-204ENST00000444129 EHMT2Q96KQ7 1210 aa13.21□□□□□ -0.29
RECQL-204ENST00000444129 FAM9AQ8IZU1 332 aaPredicted RBP12.92□□□□□ -0.34
RECQL-204ENST00000444129 ABCC9O60706 1549 aa12.77□□□□□ -0.37
RECQL-204ENST00000444129 TTBK1Q5TCY1 1321 aaPredicted RBP12.65□□□□□ -0.38
RECQL-204ENST00000444129 RANGAP1P46060 587 aaPredicted RBP12.62□□□□□ -0.39
RECQL-204ENST00000444129 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
RECQL-204ENST00000444129 TRIM41Q8WV44 630 aa12.61□□□□□ -0.39
RECQL-204ENST00000444129 PCGF6Q9BYE7 350 aa12.47□□□□□ -0.41
RECQL-204ENST00000444129 LOC105371045A0A1W2PR82 267 aa12.42□□□□□ -0.42
RECQL-204ENST00000444129 PPARGC1BQ86YN6 1023 aaKnown RBP12.41□□□□□ -0.42
RECQL-204ENST00000444129 CHIC1Q5VXU3 224 aa12.41□□□□□ -0.42
RECQL-204ENST00000444129 UBTFP17480 764 aaKnown RBP12.36□□□□□ -0.43
RECQL-204ENST00000444129 APLP2Q06481 763 aa12.31□□□□□ -0.44
RECQL-204ENST00000444129 ATP1B4Q9UN42 357 aaPredicted RBP12.27□□□□□ -0.44
RECQL-204ENST00000444129 ZCCHC6Q5VYS8 1495 aaKnown RBP12.23□□□□□ -0.45
RECQL-204ENST00000444129 SCRIBQ14160 1630 aa12.16□□□□□ -0.46
RECQL-204ENST00000444129 CCDC180Q9P1Z9 1646 aa12.07□□□□□ -0.48
RECQL-204ENST00000444129 CCER1Q8TC90 406 aaPredicted RBP12.01□□□□□ -0.49
RECQL-204ENST00000444129 ITGAEP38570 1179 aa11.97□□□□□ -0.49
RECQL-204ENST00000444129 HNRNPUL2Q1KMD3 747 aaKnown RBP11.9□□□□□ -0.5
RECQL-204ENST00000444129 TRIM26Q12899 539 aaPredicted RBP11.89□□□□□ -0.51
RECQL-204ENST00000444129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.87□□□□□ -0.51
RECQL-204ENST00000444129 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
RECQL-204ENST00000444129 P3H3Q8IVL6 736 aa11.78□□□□□ -0.52
RECQL-204ENST00000444129 CECR2Q9BXF3 1484 aa11.78□□□□□ -0.52
RECQL-204ENST00000444129 FBLN2P98095 1184 aa11.78□□□□□ -0.52
RECQL-204ENST00000444129 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
RECQL-204ENST00000444129 RB1CC1Q8TDY2 1594 aa11.76□□□□□ -0.53
RECQL-204ENST00000444129 ARID3CA6NKF2 412 aa11.74□□□□□ -0.53
RECQL-204ENST00000444129 HRCP23327 699 aa11.71□□□□□ -0.54
RECQL-204ENST00000444129 NACADO15069 1562 aa11.69□□□□□ -0.54
RECQL-204ENST00000444129 ZEB1P37275 1124 aaPredicted RBP11.68□□□□□ -0.54
RECQL-204ENST00000444129 MYO15BQ96JP2 1530 aa11.66□□□□□ -0.54
RECQL-204ENST00000444129 FAM50AQ14320 339 aaKnown RBP11.63□□□□□ -0.55
RECQL-204ENST00000444129 MYT1LQ9UL68 1186 aa11.63□□□□□ -0.55
RECQL-204ENST00000444129 YTHDC1Q96MU7 727 aaKnown RBP11.62□□□□□ -0.55
RECQL-204ENST00000444129 DCAF1Q9Y4B6 1507 aa11.59□□□□□ -0.55
RECQL-204ENST00000444129 CNGB1Q14028 1251 aaPredicted RBP11.57□□□□□ -0.56
RECQL-204ENST00000444129 MROH2BQ7Z745 1585 aa11.56□□□□□ -0.56
RECQL-204ENST00000444129 POLR3GLQ9BT43 218 aa11.51□□□□□ -0.57
RECQL-204ENST00000444129 BAZ1BQ9UIG0 1483 aaKnown RBP11.5□□□□□ -0.57
RECQL-204ENST00000444129 NEUROD1Q13562 356 aa11.48□□□□□ -0.57
RECQL-204ENST00000444129 BAZ1AQ9NRL2 1556 aaPredicted RBP11.45□□□□□ -0.58
RECQL-204ENST00000444129 TRIM52Q96A61 297 aa11.45□□□□□ -0.58
RECQL-204ENST00000444129 WRNQ14191 1432 aaPredicted RBP eCLIP11.42□□□□□ -0.58
RECQL-204ENST00000444129 ZNF777Q9ULD5 760 aaPredicted RBP11.41□□□□□ -0.58
RECQL-204ENST00000444129 WIZO95785 1651 aa11.38□□□□□ -0.59
RECQL-204ENST00000444129 SOGA1O94964 1423 aa11.38□□□□□ -0.59
RECQL-204ENST00000444129 CCDC88BA6NC98 1476 aa11.38□□□□□ -0.59
RECQL-204ENST00000444129 CENPBP07199 599 aaPredicted RBP11.37□□□□□ -0.59
RECQL-204ENST00000444129 ABCC8Q09428 1581 aa11.36□□□□□ -0.59
RECQL-204ENST00000444129 ZNF326Q5BKZ1 582 aaKnown RBP11.34□□□□□ -0.59
RECQL-204ENST00000444129 CHMP7Q8WUX9 453 aaPredicted RBP11.33□□□□□ -0.6
RECQL-204ENST00000444129 CHIC2Q9UKJ5 165 aa11.32□□□□□ -0.6
RECQL-204ENST00000444129 DIEXFQ68CQ4 756 aaKnown RBP11.31□□□□□ -0.6
RECQL-204ENST00000444129 CLIP1P30622 1438 aa11.31□□□□□ -0.6
RECQL-204ENST00000444129 CEP162Q5TB80 1403 aa11.29□□□□□ -0.6
RECQL-204ENST00000444129 ATAD2BQ9ULI0 1458 aa11.23□□□□□ -0.61
RECQL-204ENST00000444129 KIF27Q86VH2 1401 aa11.22□□□□□ -0.61
RECQL-204ENST00000444129 TDRD9Q8NDG6 1382 aaKnown RBP11.21□□□□□ -0.61
RECQL-204ENST00000444129 GOLGA3Q08378 1498 aa11.2□□□□□ -0.62
RECQL-204ENST00000444129 CDK11AQ9UQ88 783 aaPredicted RBP11.2□□□□□ -0.62
RECQL-204ENST00000444129 CUX2O14529 1486 aa11.2□□□□□ -0.62
RECQL-204ENST00000444129 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
RECQL-204ENST00000444129 KCNH8Q96L42 1107 aa11.19□□□□□ -0.62
RECQL-204ENST00000444129 ERCC6Q03468 1493 aa11.18□□□□□ -0.62
RECQL-204ENST00000444129 RUSC2Q8N2Y8 1516 aa11.18□□□□□ -0.62
RECQL-204ENST00000444129 MTUS2Q5JR59 1369 aa11.18□□□□□ -0.62
RECQL-204ENST00000444129 TNIKQ9UKE5 1360 aa11.17□□□□□ -0.62
RECQL-204ENST00000444129 HIRIP3Q9BW71 556 aaPredicted RBP11.16□□□□□ -0.62
RECQL-204ENST00000444129 RRP7BPQ9NSQ0 103 aa11.16□□□□□ -0.62
RECQL-204ENST00000444129 SMARCA4P51532 1647 aa11.16□□□□□ -0.62
RECQL-204ENST00000444129 PELP1Q8IZL8 1130 aaKnown RBP11.16□□□□□ -0.62
RECQL-204ENST00000444129 EEA1Q15075 1411 aa11.15□□□□□ -0.62
RECQL-204ENST00000444129 DNAJC5BQ9UF47 199 aa11.15□□□□□ -0.62
RECQL-204ENST00000444129 SMARCA2P51531 1590 aa11.15□□□□□ -0.62
RECQL-204ENST00000444129 CARMIL1Q5VZK9 1371 aa11.15□□□□□ -0.63
RECQL-204ENST00000444129 TOP2AP11388 1531 aaKnown RBP11.14□□□□□ -0.63
RECQL-204ENST00000444129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.14□□□□□ -0.63
RECQL-204ENST00000444129 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
RECQL-204ENST00000444129 PLPPR3Q6T4P5 718 aa11.13□□□□□ -0.63
RECQL-204ENST00000444129 CEP164Q9UPV0 1460 aa11.13□□□□□ -0.63
RECQL-204ENST00000444129 CADPSQ9ULU8 1353 aa11.12□□□□□ -0.63
RECQL-204ENST00000444129 SENP3Q9H4L4 574 aaPredicted RBP11.12□□□□□ -0.63
RECQL-204ENST00000444129 KANK4Q5T7N3 995 aaPredicted RBP11.11□□□□□ -0.63
RECQL-204ENST00000444129 NEFLP07196 543 aa11.1□□□□□ -0.63
RECQL-204ENST00000444129 NPM1P06748 294 aaKnown RBP eCLIP11.08□□□□□ -0.64
RECQL-204ENST00000444129 CHGAP10645 457 aaKnown RBP11.06□□□□□ -0.64
RECQL-204ENST00000444129 PLEKHD1A6NEE1 506 aa11.04□□□□□ -0.64
RECQL-204ENST00000444129 DDX10Q13206 875 aaKnown RBP11.04□□□□□ -0.64
RECQL-204ENST00000444129 TSPY4P0CV99 314 aa11.04□□□□□ -0.64
RECQL-204ENST00000444129 TSPY10P0CW01 314 aa11.04□□□□□ -0.64
RECQL-204ENST00000444129 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
RECQL-204ENST00000444129 EIF4G1Q04637 1599 aaKnown RBP11.03□□□□□ -0.64
RECQL-204ENST00000444129 PDS5BQ9NTI5 1447 aa11.02□□□□□ -0.64
RECQL-204ENST00000444129 RAPGEF2Q9Y4G8 1499 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms