RNA–Protein interactions for RNA: ENST00000616170.4

SH3GLB1-205, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-205ENST00000616170 DCAF8L2P0C7V8 631 aa15.74■□□□□ 0.11
SH3GLB1-205ENST00000616170 SUPT5HO00267 1087 aaKnown RBP15.33■□□□□ 0.04
SH3GLB1-205ENST00000616170 NISCHQ9Y2I1 1504 aa15.17■□□□□ 0.02
SH3GLB1-205ENST00000616170 EHMT2Q96KQ7 1210 aa15.06■□□□□ 0
SH3GLB1-205ENST00000616170 SHROOM4Q9ULL8 1493 aa15.02■□□□□ -0
SH3GLB1-205ENST00000616170 PELP1Q8IZL8 1130 aaKnown RBP14.81□□□□□ -0.04
SH3GLB1-205ENST00000616170 PCGF6Q9BYE7 350 aa14.74□□□□□ -0.05
SH3GLB1-205ENST00000616170 TTBK1Q5TCY1 1321 aaPredicted RBP14.6□□□□□ -0.07
SH3GLB1-205ENST00000616170 FAM9AQ8IZU1 332 aaPredicted RBP14.51□□□□□ -0.09
SH3GLB1-205ENST00000616170 CENPBP07199 599 aaPredicted RBP14.42□□□□□ -0.1
SH3GLB1-205ENST00000616170 ERICH6Q7L0X2 663 aa14.39□□□□□ -0.11
SH3GLB1-205ENST00000616170 APLP2Q06481 763 aa14.38□□□□□ -0.11
SH3GLB1-205ENST00000616170 YTHDC1Q96MU7 727 aaKnown RBP14.31□□□□□ -0.12
SH3GLB1-205ENST00000616170 CCER1Q8TC90 406 aaPredicted RBP14.3□□□□□ -0.12
SH3GLB1-205ENST00000616170 ZEB1P37275 1124 aaPredicted RBP14.26□□□□□ -0.13
SH3GLB1-205ENST00000616170 RANGAP1P46060 587 aaPredicted RBP14.2□□□□□ -0.14
SH3GLB1-205ENST00000616170 MYT1Q01538 1121 aa14.17□□□□□ -0.14
SH3GLB1-205ENST00000616170 PPARGC1BQ86YN6 1023 aaKnown RBP14.1□□□□□ -0.15
SH3GLB1-205ENST00000616170 TRIM41Q8WV44 630 aa14.05□□□□□ -0.16
SH3GLB1-205ENST00000616170 HRCP23327 699 aa14.03□□□□□ -0.16
SH3GLB1-205ENST00000616170 NEFLP07196 543 aa14□□□□□ -0.17
SH3GLB1-205ENST00000616170 ATP1B4Q9UN42 357 aaPredicted RBP13.93□□□□□ -0.18
SH3GLB1-205ENST00000616170 TRIM26Q12899 539 aaPredicted RBP13.9□□□□□ -0.18
SH3GLB1-205ENST00000616170 UBTFP17480 764 aaKnown RBP13.89□□□□□ -0.19
SH3GLB1-205ENST00000616170 LOC105371045A0A1W2PR82 267 aa13.78□□□□□ -0.2
SH3GLB1-205ENST00000616170 ITGAEP38570 1179 aa13.64□□□□□ -0.23
SH3GLB1-205ENST00000616170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
SH3GLB1-205ENST00000616170 HNRNPUL2Q1KMD3 747 aaKnown RBP13.6□□□□□ -0.23
SH3GLB1-205ENST00000616170 CNGB1Q14028 1251 aaPredicted RBP13.6□□□□□ -0.23
SH3GLB1-205ENST00000616170 DIEXFQ68CQ4 756 aaKnown RBP13.6□□□□□ -0.23
SH3GLB1-205ENST00000616170 DAXXQ9UER7 740 aaPredicted RBP13.6□□□□□ -0.23
SH3GLB1-205ENST00000616170 POLR3GLQ9BT43 218 aa13.59□□□□□ -0.23
SH3GLB1-205ENST00000616170 CHIC1Q5VXU3 224 aa13.58□□□□□ -0.24
SH3GLB1-205ENST00000616170 GTF3C3Q9Y5Q9 886 aa13.56□□□□□ -0.24
SH3GLB1-205ENST00000616170 BCANQ96GW7 911 aa13.5□□□□□ -0.25
SH3GLB1-205ENST00000616170 RTL5Q5HYW3 569 aaPredicted RBP13.44□□□□□ -0.26
SH3GLB1-205ENST00000616170 ZNF316A6NFI3 1004 aaPredicted RBP13.34□□□□□ -0.27
SH3GLB1-205ENST00000616170 ACIN1Q9UKV3 1341 aaKnown RBP13.28□□□□□ -0.28
SH3GLB1-205ENST00000616170 CLSPNQ9HAW4 1339 aa13.27□□□□□ -0.29
SH3GLB1-205ENST00000616170 NEUROD1Q13562 356 aa13.23□□□□□ -0.29
SH3GLB1-205ENST00000616170 CDK11AQ9UQ88 783 aaPredicted RBP13.2□□□□□ -0.3
SH3GLB1-205ENST00000616170 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
SH3GLB1-205ENST00000616170 FAM50AQ14320 339 aaKnown RBP13.17□□□□□ -0.3
SH3GLB1-205ENST00000616170 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
SH3GLB1-205ENST00000616170 ANP32CO43423 234 aa13.11□□□□□ -0.31
SH3GLB1-205ENST00000616170 CCDC180Q9P1Z9 1646 aa13.09□□□□□ -0.31
SH3GLB1-205ENST00000616170 TRIM52Q96A61 297 aa13.07□□□□□ -0.32
SH3GLB1-205ENST00000616170 SCAF1Q9H7N4 1312 aaKnown RBP13.04□□□□□ -0.32
SH3GLB1-205ENST00000616170 NPM2Q86SE8 214 aaKnown RBP13.03□□□□□ -0.32
SH3GLB1-205ENST00000616170 ZNF326Q5BKZ1 582 aaKnown RBP13.01□□□□□ -0.33
SH3GLB1-205ENST00000616170 EIF5BO60841 1220 aaKnown RBP13.01□□□□□ -0.33
SH3GLB1-205ENST00000616170 FKBP8Q14318 412 aa13.01□□□□□ -0.33
SH3GLB1-205ENST00000616170 BCL11AQ9H165 835 aa12.98□□□□□ -0.33
SH3GLB1-205ENST00000616170 ANP32AP39687 249 aaKnown RBP12.97□□□□□ -0.33
SH3GLB1-205ENST00000616170 NBR1Q14596 966 aa12.91□□□□□ -0.34
SH3GLB1-205ENST00000616170 CANXP27824 592 aaKnown RBP12.87□□□□□ -0.35
SH3GLB1-205ENST00000616170 ZCCHC6Q5VYS8 1495 aaKnown RBP12.85□□□□□ -0.35
SH3GLB1-205ENST00000616170 DCAF1Q9Y4B6 1507 aa12.84□□□□□ -0.35
SH3GLB1-205ENST00000616170 HNRNPUQ00839 825 aaKnown RBP eCLIP12.8□□□□□ -0.36
SH3GLB1-205ENST00000616170 ZBTB47Q9UFB7 747 aaPredicted RBP12.8□□□□□ -0.36
SH3GLB1-205ENST00000616170 DDX10Q13206 875 aaKnown RBP12.8□□□□□ -0.36
SH3GLB1-205ENST00000616170 IRX6P78412 446 aaPredicted RBP12.78□□□□□ -0.36
SH3GLB1-205ENST00000616170 MIER1Q8N108 512 aa12.78□□□□□ -0.36
SH3GLB1-205ENST00000616170 P3H3Q8IVL6 736 aa12.77□□□□□ -0.36
SH3GLB1-205ENST00000616170 ARXQ96QS3 562 aa12.77□□□□□ -0.36
SH3GLB1-205ENST00000616170 FAM9BQ8IZU0 186 aa12.77□□□□□ -0.37
SH3GLB1-205ENST00000616170 ARID3CA6NKF2 412 aa12.74□□□□□ -0.37
SH3GLB1-205ENST00000616170 SALL2Q9Y467 1007 aaPredicted RBP12.74□□□□□ -0.37
SH3GLB1-205ENST00000616170 SLC24A1O60721 1099 aa12.72□□□□□ -0.37
SH3GLB1-205ENST00000616170 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
SH3GLB1-205ENST00000616170 MYO15BQ96JP2 1530 aa12.68□□□□□ -0.38
SH3GLB1-205ENST00000616170 CCDC136Q96JN2 1154 aa12.67□□□□□ -0.38
SH3GLB1-205ENST00000616170 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
SH3GLB1-205ENST00000616170 HIRIP3Q9BW71 556 aaPredicted RBP12.66□□□□□ -0.38
SH3GLB1-205ENST00000616170 GLIPR1L2Q4G1C9 344 aa12.66□□□□□ -0.38
SH3GLB1-205ENST00000616170 ANP32BQ92688 251 aaKnown RBP12.65□□□□□ -0.38
SH3GLB1-205ENST00000616170 HSP90AA1P07900 732 aaKnown RBP12.65□□□□□ -0.39
SH3GLB1-205ENST00000616170 TONSLQ96HA7 1378 aa12.64□□□□□ -0.39
SH3GLB1-205ENST00000616170 ANP32EQ9BTT0 268 aa12.63□□□□□ -0.39
SH3GLB1-205ENST00000616170 ZNF777Q9ULD5 760 aaPredicted RBP12.59□□□□□ -0.39
SH3GLB1-205ENST00000616170 UPF2Q9HAU5 1272 aaKnown RBP12.57□□□□□ -0.4
SH3GLB1-205ENST00000616170 ABCC9O60706 1549 aa12.56□□□□□ -0.4
SH3GLB1-205ENST00000616170 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
SH3GLB1-205ENST00000616170 SENP3-EIF4A1A0A087X0R7 540 aa12.56□□□□□ -0.4
SH3GLB1-205ENST00000616170 NEFMP07197 916 aa12.56□□□□□ -0.4
SH3GLB1-205ENST00000616170 FBLN2P98095 1184 aa12.55□□□□□ -0.4
SH3GLB1-205ENST00000616170 MRS2Q9HD23 443 aa12.55□□□□□ -0.4
SH3GLB1-205ENST00000616170 TMC1Q8TDI8 760 aa12.53□□□□□ -0.4
SH3GLB1-205ENST00000616170 CHIC2Q9UKJ5 165 aa12.49□□□□□ -0.41
SH3GLB1-205ENST00000616170 SUPT16HQ9Y5B9 1047 aaKnown RBP12.47□□□□□ -0.41
SH3GLB1-205ENST00000616170 LAS1LQ9Y4W2 734 aaKnown RBP12.44□□□□□ -0.42
SH3GLB1-205ENST00000616170 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.43□□□□□ -0.42
SH3GLB1-205ENST00000616170 KDM2AQ9Y2K7 1162 aa12.42□□□□□ -0.42
SH3GLB1-205ENST00000616170 WDR43Q15061 677 aaKnown RBP eCLIP12.41□□□□□ -0.42
SH3GLB1-205ENST00000616170 SCRIBQ14160 1630 aa12.4□□□□□ -0.42
SH3GLB1-205ENST00000616170 CHGAP10645 457 aaKnown RBP12.4□□□□□ -0.42
SH3GLB1-205ENST00000616170 DDRGK1Q96HY6 314 aa12.39□□□□□ -0.43
SH3GLB1-205ENST00000616170 TRIM44Q96DX7 344 aaPredicted RBP12.37□□□□□ -0.43
SH3GLB1-205ENST00000616170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.35□□□□□ -0.433e-6■□□□□ 8.3
SH3GLB1-205ENST00000616170 NOP58Q9Y2X3 529 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms