RNA–Protein interactions for RNA: ENST00000460111.3

RN7SL870P-201, Transcript of RNA, 7SL, cytoplasmic 870, pseudogene, humanhuman

BASIC

Gene RN7SL870P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL870P-201ENST00000460111 NISCHQ9Y2I1 1504 aa15.5■□□□□ 0.07
RN7SL870P-201ENST00000460111 CCDC180Q9P1Z9 1646 aa13.26□□□□□ -0.29
RN7SL870P-201ENST00000460111 ZCCHC6Q5VYS8 1495 aaKnown RBP13.14□□□□□ -0.31
RN7SL870P-201ENST00000460111 SHROOM4Q9ULL8 1493 aa13.1□□□□□ -0.31
RN7SL870P-201ENST00000460111 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
RN7SL870P-201ENST00000460111 DCAF1Q9Y4B6 1507 aa12.82□□□□□ -0.36
RN7SL870P-201ENST00000460111 CHIC1Q5VXU3 224 aa12.72□□□□□ -0.37
RN7SL870P-201ENST00000460111 MYO15BQ96JP2 1530 aa12.69□□□□□ -0.38
RN7SL870P-201ENST00000460111 DCAF8L2P0C7V8 631 aa12.58□□□□□ -0.4
RN7SL870P-201ENST00000460111 HRCP23327 699 aa12.58□□□□□ -0.4
RN7SL870P-201ENST00000460111 ABCC9O60706 1549 aa12.46□□□□□ -0.42
RN7SL870P-201ENST00000460111 PCGF6Q9BYE7 350 aa12.38□□□□□ -0.43
RN7SL870P-201ENST00000460111 SCRIBQ14160 1630 aa12.27□□□□□ -0.44
RN7SL870P-201ENST00000460111 RSF1Q96T23 1441 aaPredicted RBP12.26□□□□□ -0.45
RN7SL870P-201ENST00000460111 LOC105371045A0A1W2PR82 267 aa12.25□□□□□ -0.45
RN7SL870P-201ENST00000460111 RB1CC1Q8TDY2 1594 aa12.24□□□□□ -0.45
RN7SL870P-201ENST00000460111 TRIM26Q12899 539 aaPredicted RBP12.23□□□□□ -0.45
RN7SL870P-201ENST00000460111 PPARGC1BQ86YN6 1023 aaKnown RBP12.16□□□□□ -0.46
RN7SL870P-201ENST00000460111 NACADO15069 1562 aa12.16□□□□□ -0.46
RN7SL870P-201ENST00000460111 ZEB1P37275 1124 aaPredicted RBP12.12□□□□□ -0.47
RN7SL870P-201ENST00000460111 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
RN7SL870P-201ENST00000460111 MROH2BQ7Z745 1585 aa12.01□□□□□ -0.49
RN7SL870P-201ENST00000460111 BAZ1AQ9NRL2 1556 aaPredicted RBP11.99□□□□□ -0.49
RN7SL870P-201ENST00000460111 WIZO95785 1651 aa11.98□□□□□ -0.49
RN7SL870P-201ENST00000460111 CECR2Q9BXF3 1484 aa11.98□□□□□ -0.49
RN7SL870P-201ENST00000460111 EIF4G1Q04637 1599 aaKnown RBP11.94□□□□□ -0.5
RN7SL870P-201ENST00000460111 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
RN7SL870P-201ENST00000460111 TOP2AP11388 1531 aaKnown RBP11.85□□□□□ -0.51
RN7SL870P-201ENST00000460111 SMARCA4P51532 1647 aa11.81□□□□□ -0.52
RN7SL870P-201ENST00000460111 UNC13AQ9UPW8 1703 aa11.78□□□□□ -0.52
RN7SL870P-201ENST00000460111 SMARCA2P51531 1590 aa11.76□□□□□ -0.53
RN7SL870P-201ENST00000460111 WRNQ14191 1432 aaPredicted RBP eCLIP11.75□□□□□ -0.53
RN7SL870P-201ENST00000460111 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
RN7SL870P-201ENST00000460111 CCDC88BA6NC98 1476 aa11.73□□□□□ -0.53
RN7SL870P-201ENST00000460111 EEA1Q15075 1411 aa11.72□□□□□ -0.53
RN7SL870P-201ENST00000460111 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.53
RN7SL870P-201ENST00000460111 ABCC8Q09428 1581 aa11.7□□□□□ -0.54
RN7SL870P-201ENST00000460111 TNIKQ9UKE5 1360 aa11.67□□□□□ -0.54
RN7SL870P-201ENST00000460111 CEP162Q5TB80 1403 aa11.64□□□□□ -0.55
RN7SL870P-201ENST00000460111 CCER1Q8TC90 406 aaPredicted RBP11.63□□□□□ -0.55
RN7SL870P-201ENST00000460111 SCAF1Q9H7N4 1312 aaKnown RBP11.61□□□□□ -0.55
RN7SL870P-201ENST00000460111 PEG3Q9GZU2 1588 aa11.6□□□□□ -0.55
RN7SL870P-201ENST00000460111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.6□□□□□ -0.55
RN7SL870P-201ENST00000460111 GOLGA3Q08378 1498 aa11.59□□□□□ -0.55
RN7SL870P-201ENST00000460111 SOGA1O94964 1423 aa11.59□□□□□ -0.55
RN7SL870P-201ENST00000460111 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
RN7SL870P-201ENST00000460111 KIF21BO75037 1637 aa11.57□□□□□ -0.56
RN7SL870P-201ENST00000460111 BICRAQ9NZM4 1560 aa11.55□□□□□ -0.56
RN7SL870P-201ENST00000460111 ACIN1Q9UKV3 1341 aaKnown RBP11.54□□□□□ -0.56
RN7SL870P-201ENST00000460111 RUSC2Q8N2Y8 1516 aa11.52□□□□□ -0.57
RN7SL870P-201ENST00000460111 CEP164Q9UPV0 1460 aa11.51□□□□□ -0.57
RN7SL870P-201ENST00000460111 DIEXFQ68CQ4 756 aaKnown RBP11.5□□□□□ -0.57
RN7SL870P-201ENST00000460111 CENPBP07199 599 aaPredicted RBP11.49□□□□□ -0.57
RN7SL870P-201ENST00000460111 UBTFP17480 764 aaKnown RBP11.49□□□□□ -0.57
RN7SL870P-201ENST00000460111 BAZ1BQ9UIG0 1483 aaKnown RBP11.48□□□□□ -0.57
RN7SL870P-201ENST00000460111 SYNJ1O43426 1573 aa11.48□□□□□ -0.57
RN7SL870P-201ENST00000460111 ZNF316A6NFI3 1004 aaPredicted RBP11.43□□□□□ -0.58
RN7SL870P-201ENST00000460111 NEUROD1Q13562 356 aa11.43□□□□□ -0.58
RN7SL870P-201ENST00000460111 ATAD2BQ9ULI0 1458 aa11.41□□□□□ -0.58
RN7SL870P-201ENST00000460111 CLIP1P30622 1438 aa11.41□□□□□ -0.58
RN7SL870P-201ENST00000460111 VPS8Q8N3P4 1428 aa11.41□□□□□ -0.58
RN7SL870P-201ENST00000460111 TTBK1Q5TCY1 1321 aaPredicted RBP11.39□□□□□ -0.59
RN7SL870P-201ENST00000460111 BIVM-ERCC5R4GMW8 1640 aa11.39□□□□□ -0.59
RN7SL870P-201ENST00000460111 TOP2BQ02880 1626 aa11.38□□□□□ -0.59
RN7SL870P-201ENST00000460111 PABPN1Q86U42 306 aaKnown RBP eCLIP11.35□□□□□ -0.59
RN7SL870P-201ENST00000460111 ERICH3Q5RHP9 1530 aa11.35□□□□□ -0.59
RN7SL870P-201ENST00000460111 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
RN7SL870P-201ENST00000460111 APLP2Q06481 763 aa11.32□□□□□ -0.6
RN7SL870P-201ENST00000460111 RAPGEF2Q9Y4G8 1499 aa11.32□□□□□ -0.6
RN7SL870P-201ENST00000460111 HNRNPUL2Q1KMD3 747 aaKnown RBP11.28□□□□□ -0.6
RN7SL870P-201ENST00000460111 CLSPNQ9HAW4 1339 aa11.28□□□□□ -0.6
RN7SL870P-201ENST00000460111 PRXQ9BXM0 1461 aa11.25□□□□□ -0.61
RN7SL870P-201ENST00000460111 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
RN7SL870P-201ENST00000460111 ARAP1Q96P48 1450 aa11.24□□□□□ -0.61
RN7SL870P-201ENST00000460111 PRDM2Q13029 1718 aa11.23□□□□□ -0.61
RN7SL870P-201ENST00000460111 MYT1Q01538 1121 aa11.23□□□□□ -0.61
RN7SL870P-201ENST00000460111 MIER1Q8N108 512 aa11.21□□□□□ -0.61
RN7SL870P-201ENST00000460111 NCAPD3P42695 1498 aa11.19□□□□□ -0.62
RN7SL870P-201ENST00000460111 CUX1P39880 1505 aa11.19□□□□□ -0.62
RN7SL870P-201ENST00000460111 CUX2O14529 1486 aa11.18□□□□□ -0.62
RN7SL870P-201ENST00000460111 KIF27Q86VH2 1401 aa11.18□□□□□ -0.62
RN7SL870P-201ENST00000460111 RRBP1Q9P2E9 1410 aaKnown RBP11.18□□□□□ -0.62
RN7SL870P-201ENST00000460111 DHX57Q6P158 1386 aaKnown RBP11.17□□□□□ -0.62
RN7SL870P-201ENST00000460111 YTHDC1Q96MU7 727 aaKnown RBP11.14□□□□□ -0.63
RN7SL870P-201ENST00000460111 CFTRP13569 1480 aa11.12□□□□□ -0.63
RN7SL870P-201ENST00000460111 MAP3K1Q13233 1512 aa11.12□□□□□ -0.63
RN7SL870P-201ENST00000460111 RANGAP1P46060 587 aaPredicted RBP11.1□□□□□ -0.63
RN7SL870P-201ENST00000460111 ARHGAP35Q9NRY4 1499 aa11.1□□□□□ -0.63
RN7SL870P-201ENST00000460111 KANK4Q5T7N3 995 aaPredicted RBP11.08□□□□□ -0.64
RN7SL870P-201ENST00000460111 CCNB3Q8WWL7 1395 aa11.07□□□□□ -0.64
RN7SL870P-201ENST00000460111 TIAM1Q13009 1591 aa11.07□□□□□ -0.64
RN7SL870P-201ENST00000460111 CFAP43Q8NDM7 1665 aa11.04□□□□□ -0.64
RN7SL870P-201ENST00000460111 IGF1RP08069 1367 aa11□□□□□ -0.65
RN7SL870P-201ENST00000460111 SETD5Q9C0A6 1442 aa10.98□□□□□ -0.65
RN7SL870P-201ENST00000460111 LRRC9Q6ZRR7 1453 aa10.98□□□□□ -0.65
RN7SL870P-201ENST00000460111 MAPKBP1O60336 1514 aa10.98□□□□□ -0.65
RN7SL870P-201ENST00000460111 CARMIL1Q5VZK9 1371 aa10.97□□□□□ -0.65
RN7SL870P-201ENST00000460111 RAB3GAP2Q9H2M9 1393 aa10.97□□□□□ -0.65
RN7SL870P-201ENST00000460111 FHAD1B1AJZ9 1412 aa10.97□□□□□ -0.65
RN7SL870P-201ENST00000460111 FGD5Q6ZNL6 1462 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms