RNA–Protein interactions for RNA: ENST00000528300.5

LINC01588-202, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 2 BASIC

Gene LINC01588, Length 3,208 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-202ENST00000528300 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
LINC01588-202ENST00000528300 SLC24A1O60721 1099 aa16.06■□□□□ 0.16
LINC01588-202ENST00000528300 EHMT2Q96KQ7 1210 aa15.94■□□□□ 0.14
LINC01588-202ENST00000528300 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
LINC01588-202ENST00000528300 NISCHQ9Y2I1 1504 aa15.71■□□□□ 0.11
LINC01588-202ENST00000528300 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
LINC01588-202ENST00000528300 PHF23Q9BUL5 403 aaPredicted RBP15.04■□□□□ -0
LINC01588-202ENST00000528300 RTN4Q9NQC3 1192 aaKnown RBP14.99□□□□□ -0.01
LINC01588-202ENST00000528300 KCNA4P22459 653 aa14.57□□□□□ -0.08
LINC01588-202ENST00000528300 CSRNP3Q8WYN3 585 aa14.55□□□□□ -0.08
LINC01588-202ENST00000528300 PRKCSHP14314 528 aaPredicted RBP14.45□□□□□ -0.1
LINC01588-202ENST00000528300 AMER1Q5JTC6 1135 aaPredicted RBP14.13□□□□□ -0.15
LINC01588-202ENST00000528300 NCBP3Q53F19 620 aaKnown RBP14.12□□□□□ -0.15
LINC01588-202ENST00000528300 DAXXQ9UER7 740 aaPredicted RBP14.06□□□□□ -0.16
LINC01588-202ENST00000528300 SLC4A1APQ9BWU0 796 aaKnown RBP13.83□□□□□ -0.19
LINC01588-202ENST00000528300 TIMELESSQ9UNS1 1208 aa13.83□□□□□ -0.2
LINC01588-202ENST00000528300 ADRA2BP18089 450 aa13.83□□□□□ -0.2
LINC01588-202ENST00000528300 CCDC180Q9P1Z9 1646 aa13.69□□□□□ -0.22
LINC01588-202ENST00000528300 TULP1O00294 542 aaPredicted RBP13.68□□□□□ -0.22
LINC01588-202ENST00000528300 PELP1Q8IZL8 1130 aaKnown RBP13.62□□□□□ -0.23
LINC01588-202ENST00000528300 TAOK2Q9UL54 1235 aa13.59□□□□□ -0.23
LINC01588-202ENST00000528300 TPRNQ4KMQ1 711 aa13.56□□□□□ -0.24
LINC01588-202ENST00000528300 ZBTB22O15209 634 aa13.55□□□□□ -0.24
LINC01588-202ENST00000528300 MYT1Q01538 1121 aa13.39□□□□□ -0.27
LINC01588-202ENST00000528300 HAP1P54257 671 aaPredicted RBP13.34□□□□□ -0.27
LINC01588-202ENST00000528300 ZCCHC6Q5VYS8 1495 aaKnown RBP13.32□□□□□ -0.28
LINC01588-202ENST00000528300 ARXQ96QS3 562 aa13.28□□□□□ -0.28
LINC01588-202ENST00000528300 BCANQ96GW7 911 aa13.26□□□□□ -0.29
LINC01588-202ENST00000528300 PLCB2Q00722 1185 aa13.23□□□□□ -0.29
LINC01588-202ENST00000528300 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
LINC01588-202ENST00000528300 DCAF1Q9Y4B6 1507 aa13.16□□□□□ -0.3
LINC01588-202ENST00000528300 PODXL2Q9NZ53 605 aa13.15□□□□□ -0.3
LINC01588-202ENST00000528300 FKBP8Q14318 412 aa13.14□□□□□ -0.31
LINC01588-202ENST00000528300 NPM3O75607 178 aaKnown RBP13.06□□□□□ -0.32
LINC01588-202ENST00000528300 HOMEZQ8IX15 550 aa13.04□□□□□ -0.32
LINC01588-202ENST00000528300 GTF3C3Q9Y5Q9 886 aa13.03□□□□□ -0.32
LINC01588-202ENST00000528300 RANGAP1P46060 587 aaPredicted RBP13.02□□□□□ -0.33
LINC01588-202ENST00000528300 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.33
LINC01588-202ENST00000528300 DCAF8L2P0C7V8 631 aa12.98□□□□□ -0.33
LINC01588-202ENST00000528300 APLP2Q06481 763 aa12.96□□□□□ -0.33
LINC01588-202ENST00000528300 FBLN2P98095 1184 aa12.94□□□□□ -0.34
LINC01588-202ENST00000528300 TTBK1Q5TCY1 1321 aaPredicted RBP12.91□□□□□ -0.34
LINC01588-202ENST00000528300 KDM2AQ9Y2K7 1162 aa12.89□□□□□ -0.35
LINC01588-202ENST00000528300 SUPT5HO00267 1087 aaKnown RBP12.87□□□□□ -0.35
LINC01588-202ENST00000528300 MYO15BQ96JP2 1530 aa12.85□□□□□ -0.35
LINC01588-202ENST00000528300 SHROOM4Q9ULL8 1493 aa12.84□□□□□ -0.35
LINC01588-202ENST00000528300 HRCP23327 699 aa12.75□□□□□ -0.37
LINC01588-202ENST00000528300 ERICH6Q7L0X2 663 aa12.74□□□□□ -0.37
LINC01588-202ENST00000528300 C14orf37Q86TY3 774 aa12.74□□□□□ -0.37
LINC01588-202ENST00000528300 TMEM132AQ24JP5 1023 aa12.69□□□□□ -0.38
LINC01588-202ENST00000528300 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
LINC01588-202ENST00000528300 NPM2Q86SE8 214 aaKnown RBP12.67□□□□□ -0.38
LINC01588-202ENST00000528300 TRIM26Q12899 539 aaPredicted RBP12.64□□□□□ -0.39
LINC01588-202ENST00000528300 UBTFP17480 764 aaKnown RBP12.62□□□□□ -0.39
LINC01588-202ENST00000528300 ABCC9O60706 1549 aa12.61□□□□□ -0.39
LINC01588-202ENST00000528300 NACADO15069 1562 aa12.55□□□□□ -0.4
LINC01588-202ENST00000528300 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
LINC01588-202ENST00000528300 EIF5BO60841 1220 aaKnown RBP12.53□□□□□ -0.4
LINC01588-202ENST00000528300 SCAF1Q9H7N4 1312 aaKnown RBP12.48□□□□□ -0.41
LINC01588-202ENST00000528300 PLEKHG5O94827 1062 aa12.48□□□□□ -0.41
LINC01588-202ENST00000528300 SENP3Q9H4L4 574 aaPredicted RBP12.47□□□□□ -0.41
LINC01588-202ENST00000528300 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
LINC01588-202ENST00000528300 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
LINC01588-202ENST00000528300 SCRIBQ14160 1630 aa12.4□□□□□ -0.43
LINC01588-202ENST00000528300 LOC105371045A0A1W2PR82 267 aa12.39□□□□□ -0.43
LINC01588-202ENST00000528300 PAXIP1Q6ZW49 1069 aaPredicted RBP12.37□□□□□ -0.43
LINC01588-202ENST00000528300 TSHZ2Q9NRE2 1034 aa12.34□□□□□ -0.43
LINC01588-202ENST00000528300 RB1CC1Q8TDY2 1594 aa12.34□□□□□ -0.43
LINC01588-202ENST00000528300 RSF1Q96T23 1441 aaPredicted RBP12.29□□□□□ -0.44
LINC01588-202ENST00000528300 TRHP20396 242 aaPredicted RBP12.28□□□□□ -0.44
LINC01588-202ENST00000528300 PPARGC1BQ86YN6 1023 aaKnown RBP12.26□□□□□ -0.45
LINC01588-202ENST00000528300 ARID3AQ99856 593 aa12.26□□□□□ -0.45
LINC01588-202ENST00000528300 BCL11AQ9H165 835 aa12.26□□□□□ -0.45
LINC01588-202ENST00000528300 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC01588-202ENST00000528300 NBR1Q14596 966 aa12.18□□□□□ -0.46
LINC01588-202ENST00000528300 BAZ1AQ9NRL2 1556 aaPredicted RBP12.16□□□□□ -0.46
LINC01588-202ENST00000528300 FAM9AQ8IZU1 332 aaPredicted RBP12.13□□□□□ -0.47
LINC01588-202ENST00000528300 UNC13AQ9UPW8 1703 aa12.1□□□□□ -0.47
LINC01588-202ENST00000528300 PKD2Q13563 968 aa12.09□□□□□ -0.47
LINC01588-202ENST00000528300 MROH2BQ7Z745 1585 aa12.08□□□□□ -0.48
LINC01588-202ENST00000528300 WIZO95785 1651 aa12.04□□□□□ -0.48
LINC01588-202ENST00000528300 EIF4G1Q04637 1599 aaKnown RBP12.03□□□□□ -0.48
LINC01588-202ENST00000528300 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.48
LINC01588-202ENST00000528300 SMARCA4P51532 1647 aa12.02□□□□□ -0.49
LINC01588-202ENST00000528300 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
LINC01588-202ENST00000528300 TOP2AP11388 1531 aaKnown RBP12.02□□□□□ -0.49
LINC01588-202ENST00000528300 IGSF3O75054 1194 aa11.99□□□□□ -0.49
LINC01588-202ENST00000528300 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.99□□□□□ -0.49
LINC01588-202ENST00000528300 CENPBP07199 599 aaPredicted RBP11.94□□□□□ -0.5
LINC01588-202ENST00000528300 PEG3Q9GZU2 1588 aa11.93□□□□□ -0.5
LINC01588-202ENST00000528300 ACIN1Q9UKV3 1341 aaKnown RBP11.93□□□□□ -0.5
LINC01588-202ENST00000528300 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
LINC01588-202ENST00000528300 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
LINC01588-202ENST00000528300 PCGF6Q9BYE7 350 aa11.9□□□□□ -0.51
LINC01588-202ENST00000528300 FOXD1Q16676 465 aa11.89□□□□□ -0.51
LINC01588-202ENST00000528300 SMARCA2P51531 1590 aa11.88□□□□□ -0.51
LINC01588-202ENST00000528300 CHMP4AQ9BY43 222 aa11.86□□□□□ -0.51
LINC01588-202ENST00000528300 ARID3CA6NKF2 412 aa11.85□□□□□ -0.51
LINC01588-202ENST00000528300 BICRAQ9NZM4 1560 aa11.84□□□□□ -0.51
LINC01588-202ENST00000528300 ZNF428Q96B54 188 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms