RNA–Protein interactions for RNA: ENST00000610229.1

AC004448.4-210, humanhuman

TSL 5 BASIC

Gene AC004448.4, Length 833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.4-210ENST00000610229 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
AC004448.4-210ENST00000610229 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
AC004448.4-210ENST00000610229 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
AC004448.4-210ENST00000610229 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
AC004448.4-210ENST00000610229 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
AC004448.4-210ENST00000610229 FOXD1Q16676 465 aa16.31■□□□□ 0.2
AC004448.4-210ENST00000610229 ADRA2BP18089 450 aa15.91■□□□□ 0.14
AC004448.4-210ENST00000610229 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
AC004448.4-210ENST00000610229 NISCHQ9Y2I1 1504 aa15.65■□□□□ 0.1
AC004448.4-210ENST00000610229 PIAS4Q8N2W9 510 aaPredicted RBP15.46■□□□□ 0.07
AC004448.4-210ENST00000610229 MSH5O43196 834 aa14.95□□□□□ -0.02
AC004448.4-210ENST00000610229 PPP4R3CPQ6ZMV5 832 aa14.91□□□□□ -0.02
AC004448.4-210ENST00000610229 KCNA4P22459 653 aa14.89□□□□□ -0.03
AC004448.4-210ENST00000610229 NCBP3Q53F19 620 aaKnown RBP14.62□□□□□ -0.07
AC004448.4-210ENST00000610229 SCAF1Q9H7N4 1312 aaKnown RBP14.6□□□□□ -0.07
AC004448.4-210ENST00000610229 CNKSR2Q8WXI2 1034 aa14.43□□□□□ -0.1
AC004448.4-210ENST00000610229 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
AC004448.4-210ENST00000610229 MAPK8IP2Q13387 824 aaPredicted RBP14.34□□□□□ -0.11
AC004448.4-210ENST00000610229 SLC4A1APQ9BWU0 796 aaKnown RBP14.24□□□□□ -0.13
AC004448.4-210ENST00000610229 EHMT2Q96KQ7 1210 aa14.16□□□□□ -0.14
AC004448.4-210ENST00000610229 DMRT2Q9Y5R5 561 aa14.11□□□□□ -0.15
AC004448.4-210ENST00000610229 RNF216Q9NWF9 866 aaPredicted RBP14.08□□□□□ -0.16
AC004448.4-210ENST00000610229 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
AC004448.4-210ENST00000610229 HOXD11P31277 338 aaPredicted RBP13.94□□□□□ -0.18
AC004448.4-210ENST00000610229 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
AC004448.4-210ENST00000610229 CCDC180Q9P1Z9 1646 aa13.73□□□□□ -0.21
AC004448.4-210ENST00000610229 POTEDQ86YR6 584 aa13.73□□□□□ -0.21
AC004448.4-210ENST00000610229 ZBTB22O15209 634 aa13.69□□□□□ -0.22
AC004448.4-210ENST00000610229 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
AC004448.4-210ENST00000610229 ABCC9O60706 1549 aa13.6□□□□□ -0.23
AC004448.4-210ENST00000610229 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
AC004448.4-210ENST00000610229 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
AC004448.4-210ENST00000610229 MYCNP04198 464 aaPredicted RBP13.31□□□□□ -0.28
AC004448.4-210ENST00000610229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.28
AC004448.4-210ENST00000610229 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
AC004448.4-210ENST00000610229 ATXN8OSP0DMR3 200 aa13.14□□□□□ -0.31
AC004448.4-210ENST00000610229 DCAF1Q9Y4B6 1507 aa13.09□□□□□ -0.31
AC004448.4-210ENST00000610229 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
AC004448.4-210ENST00000610229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
AC004448.4-210ENST00000610229 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
AC004448.4-210ENST00000610229 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
AC004448.4-210ENST00000610229 ATF5Q9Y2D1 282 aaPredicted RBP12.89□□□□□ -0.35
AC004448.4-210ENST00000610229 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
AC004448.4-210ENST00000610229 RB1CC1Q8TDY2 1594 aa12.87□□□□□ -0.35
AC004448.4-210ENST00000610229 APLP2Q06481 763 aa12.86□□□□□ -0.35
AC004448.4-210ENST00000610229 RNF39Q9H2S5 420 aa12.82□□□□□ -0.36
AC004448.4-210ENST00000610229 NACADO15069 1562 aa12.77□□□□□ -0.37
AC004448.4-210ENST00000610229 SHROOM4Q9ULL8 1493 aa12.75□□□□□ -0.37
AC004448.4-210ENST00000610229 UNC13AQ9UPW8 1703 aa12.75□□□□□ -0.37
AC004448.4-210ENST00000610229 DCAF8L2P0C7V8 631 aa12.71□□□□□ -0.37
AC004448.4-210ENST00000610229 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
AC004448.4-210ENST00000610229 ZNF219Q9P2Y4 722 aaPredicted RBP12.68□□□□□ -0.38
AC004448.4-210ENST00000610229 PABPN1Q86U42 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
AC004448.4-210ENST00000610229 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
AC004448.4-210ENST00000610229 BICRAQ9NZM4 1560 aa12.6□□□□□ -0.39
AC004448.4-210ENST00000610229 TRHP20396 242 aaPredicted RBP12.59□□□□□ -0.39
AC004448.4-210ENST00000610229 CAPN15O75808 1086 aa12.58□□□□□ -0.4
AC004448.4-210ENST00000610229 FKBP8Q14318 412 aa12.52□□□□□ -0.41
AC004448.4-210ENST00000610229 SUPT5HO00267 1087 aaKnown RBP12.46□□□□□ -0.41
AC004448.4-210ENST00000610229 POLA2Q14181 598 aa12.45□□□□□ -0.42
AC004448.4-210ENST00000610229 SCRIBQ14160 1630 aa12.44□□□□□ -0.42
AC004448.4-210ENST00000610229 FBLN2P98095 1184 aa12.37□□□□□ -0.43
AC004448.4-210ENST00000610229 ABCB7O75027 752 aa12.36□□□□□ -0.43
AC004448.4-210ENST00000610229 MKRN4PQ13434 485 aaPredicted RBP12.35□□□□□ -0.43
AC004448.4-210ENST00000610229 CC2D2AQ9P2K1 1620 aa12.31□□□□□ -0.44
AC004448.4-210ENST00000610229 DSG3P32926 999 aa12.3□□□□□ -0.44
AC004448.4-210ENST00000610229 ZBTB12Q9Y330 459 aaPredicted RBP12.3□□□□□ -0.44
AC004448.4-210ENST00000610229 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.45
AC004448.4-210ENST00000610229 EIF4G1Q04637 1599 aaKnown RBP12.25□□□□□ -0.45
AC004448.4-210ENST00000610229 CECR2Q9BXF3 1484 aa12.23□□□□□ -0.45
AC004448.4-210ENST00000610229 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
AC004448.4-210ENST00000610229 BAZ1AQ9NRL2 1556 aaPredicted RBP12.18□□□□□ -0.46
AC004448.4-210ENST00000610229 RSF1Q96T23 1441 aaPredicted RBP12.16□□□□□ -0.46
AC004448.4-210ENST00000610229 PROM2Q8N271 834 aa12.08□□□□□ -0.48
AC004448.4-210ENST00000610229 SMARCA4P51532 1647 aa12.02□□□□□ -0.49
AC004448.4-210ENST00000610229 OSCARQ8IYS5 282 aa12.02□□□□□ -0.49
AC004448.4-210ENST00000610229 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
AC004448.4-210ENST00000610229 MROH2BQ7Z745 1585 aa12□□□□□ -0.49
AC004448.4-210ENST00000610229 SPDYE2BA6NHP3 402 aa11.99□□□□□ -0.49
AC004448.4-210ENST00000610229 SPDYE6P0CI01 402 aa11.99□□□□□ -0.49
AC004448.4-210ENST00000610229 SPDYE2Q495Y8 402 aa11.99□□□□□ -0.49
AC004448.4-210ENST00000610229 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
AC004448.4-210ENST00000610229 TOP2AP11388 1531 aaKnown RBP11.96□□□□□ -0.49
AC004448.4-210ENST00000610229 WIZO95785 1651 aa11.95□□□□□ -0.5
AC004448.4-210ENST00000610229 AMER1Q5JTC6 1135 aaPredicted RBP11.95□□□□□ -0.5
AC004448.4-210ENST00000610229 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
AC004448.4-210ENST00000610229 PEG3Q9GZU2 1588 aa11.9□□□□□ -0.5
AC004448.4-210ENST00000610229 RTN4Q9NQC3 1192 aaKnown RBP11.89□□□□□ -0.51
AC004448.4-210ENST00000610229 SMARCA2P51531 1590 aa11.86□□□□□ -0.51
AC004448.4-210ENST00000610229 VASPP50552 380 aaPredicted RBP11.83□□□□□ -0.52
AC004448.4-210ENST00000610229 TRIM41Q8WV44 630 aa11.83□□□□□ -0.52
AC004448.4-210ENST00000610229 NCAPD3P42695 1498 aa11.79□□□□□ -0.52
AC004448.4-210ENST00000610229 DNAJC5Q9H3Z4 198 aa11.78□□□□□ -0.52
AC004448.4-210ENST00000610229 ATAD2BQ9ULI0 1458 aa11.77□□□□□ -0.52
AC004448.4-210ENST00000610229 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
AC004448.4-210ENST00000610229 STAG3Q9UJ98 1225 aa11.74□□□□□ -0.53
AC004448.4-210ENST00000610229 CCDC88BA6NC98 1476 aa11.72□□□□□ -0.53
AC004448.4-210ENST00000610229 BAZ1BQ9UIG0 1483 aaKnown RBP11.72□□□□□ -0.53
AC004448.4-210ENST00000610229 NESP48681 1621 aa11.71□□□□□ -0.54
AC004448.4-210ENST00000610229 HMGXB3Q12766 1538 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms