Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AL390728.3-201ENST00000452704 270 ntBASIC9.99□□□□□ -0.81
HFM1A2PYH4 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 AC015524.1-201ENST00000491585 472 ntBASIC9.99□□□□□ -0.81
HFM1A2PYH4 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
HFM1A2PYH4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC9.99□□□□□ -0.81
HFM1A2PYH4 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HFM1A2PYH4 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
HFM1A2PYH4 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
HFM1A2PYH4 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC9.98□□□□□ -0.81
HFM1A2PYH4 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HFM1A2PYH4 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HFM1A2PYH4 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC9.98□□□□□ -0.81
HFM1A2PYH4 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HFM1A2PYH4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
HFM1A2PYH4 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HFM1A2PYH4 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
HFM1A2PYH4 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HFM1A2PYH4 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
HFM1A2PYH4 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HFM1A2PYH4 U3.52-201ENST00000384034 216 ntBASIC9.98□□□□□ -0.81
HFM1A2PYH4 RNU4ATAC2P-201ENST00000408674 126 ntBASIC9.98□□□□□ -0.81
HFM1A2PYH4 RN7SKP296-201ENST00000411185 341 ntBASIC9.98□□□□□ -0.81
HFM1A2PYH4 AC239367.3-201ENST00000428996 814 ntBASIC9.98□□□□□ -0.81
HFM1A2PYH4 VN1R53P-201ENST00000429536 957 ntBASIC9.98□□□□□ -0.81
HFM1A2PYH4 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC9.98□□□□□ -0.81
HFM1A2PYH4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC9.98□□□□□ -0.81
HFM1A2PYH4 RPS7P10-201ENST00000464254 603 ntBASIC9.98□□□□□ -0.81
HFM1A2PYH4 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC9.98□□□□□ -0.81
HFM1A2PYH4 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
HFM1A2PYH4 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC9.98□□□□□ -0.81
HFM1A2PYH4 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC9.98□□□□□ -0.81
HFM1A2PYH4 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC9.97□□□□□ -0.81
HFM1A2PYH4 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HFM1A2PYH4 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HFM1A2PYH4 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
HFM1A2PYH4 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HFM1A2PYH4 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HFM1A2PYH4 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HFM1A2PYH4 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
HFM1A2PYH4 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC9.97□□□□□ -0.81
HFM1A2PYH4 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
HFM1A2PYH4 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
HFM1A2PYH4 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
HFM1A2PYH4 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
HFM1A2PYH4 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
HFM1A2PYH4 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
HFM1A2PYH4 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
HFM1A2PYH4 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HFM1A2PYH4 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HFM1A2PYH4 VN1R12P-201ENST00000403778 876 ntBASIC9.97□□□□□ -0.81
HFM1A2PYH4 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC9.97□□□□□ -0.81
HFM1A2PYH4 AC010086.1-201ENST00000437359 1052 ntBASIC9.97□□□□□ -0.81
HFM1A2PYH4 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC9.97□□□□□ -0.81
HFM1A2PYH4 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC9.97□□□□□ -0.81
HFM1A2PYH4 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC9.97□□□□□ -0.81
HFM1A2PYH4 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC9.97□□□□□ -0.81
HFM1A2PYH4 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
HFM1A2PYH4 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
HFM1A2PYH4 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
HFM1A2PYH4 OFD1P10Y-201ENST00000434110 1433 ntBASIC9.97□□□□□ -0.81
HFM1A2PYH4 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HFM1A2PYH4 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
HFM1A2PYH4 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
HFM1A2PYH4 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC9.96□□□□□ -0.81
HFM1A2PYH4 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
HFM1A2PYH4 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
HFM1A2PYH4 NEK2P4-201ENST00000425793 1329 ntBASIC9.96□□□□□ -0.81
HFM1A2PYH4 AL512310.3-201ENST00000547023 1335 ntBASIC9.96□□□□□ -0.81
HFM1A2PYH4 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC9.96□□□□□ -0.81
HFM1A2PYH4 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
HFM1A2PYH4 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC9.96□□□□□ -0.81
HFM1A2PYH4 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
HFM1A2PYH4 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC9.96□□□□□ -0.81
HFM1A2PYH4 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
HFM1A2PYH4 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC9.96□□□□□ -0.82
HFM1A2PYH4 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
HFM1A2PYH4 RPL5P20-201ENST00000403848 896 ntBASIC9.96□□□□□ -0.82
HFM1A2PYH4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC9.96□□□□□ -0.82
HFM1A2PYH4 THEM7P-201ENST00000419556 672 ntBASIC9.96□□□□□ -0.82
HFM1A2PYH4 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC9.96□□□□□ -0.82
HFM1A2PYH4 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC9.96□□□□□ -0.82
HFM1A2PYH4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC9.96□□□□□ -0.82
HFM1A2PYH4 AC117395.1-201ENST00000487390 403 ntBASIC9.96□□□□□ -0.82
HFM1A2PYH4 GUSBP9-201ENST00000510138 584 ntBASIC9.96□□□□□ -0.82
HFM1A2PYH4 AC122713.1-201ENST00000518368 1015 ntBASIC9.96□□□□□ -0.82
HFM1A2PYH4 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC9.96□□□□□ -0.82
HFM1A2PYH4 AL133399.1-201ENST00000527476 298 ntBASIC9.96□□□□□ -0.82
HFM1A2PYH4 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC9.96□□□□□ -0.82
HFM1A2PYH4 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC9.96□□□□□ -0.82
HFM1A2PYH4 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC9.96□□□□□ -0.82
HFM1A2PYH4 AL157899.1-201ENST00000604110 936 ntBASIC9.96□□□□□ -0.82
HFM1A2PYH4 AL390877.1-201ENST00000605704 214 ntBASIC9.96□□□□□ -0.82
HFM1A2PYH4 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
HFM1A2PYH4 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC9.96□□□□□ -0.82
HFM1A2PYH4 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
HFM1A2PYH4 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
HFM1A2PYH4 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms