RNA–Protein interactions for RNA: ENST00000424629.5

ZNF561-204, Transcript of zinc finger protein 561, humanhuman

TSL 2 BASIC

Gene ZNF561, Length 4,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-204ENST00000424629 NISCHQ9Y2I1 1504 aa14.67□□□□□ -0.06
ZNF561-204ENST00000424629 DCAF8L2P0C7V8 631 aa12.98□□□□□ -0.33
ZNF561-204ENST00000424629 CCDC180Q9P1Z9 1646 aa12.88□□□□□ -0.35
ZNF561-204ENST00000424629 ZCCHC6Q5VYS8 1495 aaKnown RBP12.25□□□□□ -0.45
ZNF561-204ENST00000424629 ABCC9O60706 1549 aa12.25□□□□□ -0.45
ZNF561-204ENST00000424629 DCAF1Q9Y4B6 1507 aa12.24□□□□□ -0.45
ZNF561-204ENST00000424629 NACADO15069 1562 aa12.22□□□□□ -0.45
ZNF561-204ENST00000424629 RB1CC1Q8TDY2 1594 aa12.2□□□□□ -0.46
ZNF561-204ENST00000424629 SHROOM4Q9ULL8 1493 aa12.17□□□□□ -0.46
ZNF561-204ENST00000424629 MYO15BQ96JP2 1530 aa12.16□□□□□ -0.46
ZNF561-204ENST00000424629 SUPT5HO00267 1087 aaKnown RBP12.07□□□□□ -0.48
ZNF561-204ENST00000424629 FAM9AQ8IZU1 332 aaPredicted RBP11.95□□□□□ -0.5
ZNF561-204ENST00000424629 SCRIBQ14160 1630 aa11.76□□□□□ -0.53
ZNF561-204ENST00000424629 BAZ1AQ9NRL2 1556 aaPredicted RBP11.62□□□□□ -0.55
ZNF561-204ENST00000424629 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
ZNF561-204ENST00000424629 PABPN1Q86U42 306 aaKnown RBP eCLIP11.59□□□□□ -0.55
ZNF561-204ENST00000424629 APLP2Q06481 763 aa11.58□□□□□ -0.56
ZNF561-204ENST00000424629 SMARCA2P51531 1590 aa11.5□□□□□ -0.57
ZNF561-204ENST00000424629 BAZ1BQ9UIG0 1483 aaKnown RBP11.42□□□□□ -0.58
ZNF561-204ENST00000424629 RSF1Q96T23 1441 aaPredicted RBP11.33□□□□□ -0.6
ZNF561-204ENST00000424629 EEA1Q15075 1411 aa11.29□□□□□ -0.6
ZNF561-204ENST00000424629 UBTFP17480 764 aaKnown RBP11.26□□□□□ -0.61
ZNF561-204ENST00000424629 TOP2AP11388 1531 aaKnown RBP11.24□□□□□ -0.61
ZNF561-204ENST00000424629 SMARCA4P51532 1647 aa11.23□□□□□ -0.61
ZNF561-204ENST00000424629 CHIC1Q5VXU3 224 aa11.2□□□□□ -0.62
ZNF561-204ENST00000424629 PDS5BQ9NTI5 1447 aa11.18□□□□□ -0.62
ZNF561-204ENST00000424629 ABCC8Q09428 1581 aa11.16□□□□□ -0.62
ZNF561-204ENST00000424629 ATAD2BQ9ULI0 1458 aa11.14□□□□□ -0.63
ZNF561-204ENST00000424629 NCAPD3P42695 1498 aa11.13□□□□□ -0.63
ZNF561-204ENST00000424629 HMGXB3Q12766 1538 aa11.13□□□□□ -0.63
ZNF561-204ENST00000424629 MROH2BQ7Z745 1585 aa11.11□□□□□ -0.63
ZNF561-204ENST00000424629 CECR2Q9BXF3 1484 aa11.1□□□□□ -0.63
ZNF561-204ENST00000424629 EIF4G1Q04637 1599 aaKnown RBP11.08□□□□□ -0.64
ZNF561-204ENST00000424629 WRNQ14191 1432 aaPredicted RBP eCLIP11.07□□□□□ -0.64
ZNF561-204ENST00000424629 ZEB1P37275 1124 aaPredicted RBP11.07□□□□□ -0.64
ZNF561-204ENST00000424629 ERCC6Q03468 1493 aa11.07□□□□□ -0.64
ZNF561-204ENST00000424629 CSRNP3Q8WYN3 585 aa11.04□□□□□ -0.64
ZNF561-204ENST00000424629 KIF27Q86VH2 1401 aa11.03□□□□□ -0.64
ZNF561-204ENST00000424629 CADPSQ9ULU8 1353 aa11.02□□□□□ -0.64
ZNF561-204ENST00000424629 ACIN1Q9UKV3 1341 aaKnown RBP11.02□□□□□ -0.65
ZNF561-204ENST00000424629 CDK11AQ9UQ88 783 aaPredicted RBP10.98□□□□□ -0.65
ZNF561-204ENST00000424629 PEG3Q9GZU2 1588 aa10.98□□□□□ -0.65
ZNF561-204ENST00000424629 CCDC88BA6NC98 1476 aa10.98□□□□□ -0.65
ZNF561-204ENST00000424629 BICRAQ9NZM4 1560 aa10.96□□□□□ -0.65
ZNF561-204ENST00000424629 CEP164Q9UPV0 1460 aa10.95□□□□□ -0.66
ZNF561-204ENST00000424629 ATP1B4Q9UN42 357 aaPredicted RBP10.95□□□□□ -0.66
ZNF561-204ENST00000424629 WIZO95785 1651 aa10.94□□□□□ -0.66
ZNF561-204ENST00000424629 GOLGA3Q08378 1498 aa10.93□□□□□ -0.66
ZNF561-204ENST00000424629 EHMT2Q96KQ7 1210 aa10.9□□□□□ -0.66
ZNF561-204ENST00000424629 UNC13AQ9UPW8 1703 aa10.88□□□□□ -0.67
ZNF561-204ENST00000424629 CC2D2AQ9P2K1 1620 aa10.87□□□□□ -0.67
ZNF561-204ENST00000424629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.87□□□□□ -0.67
ZNF561-204ENST00000424629 HNRNPUL2Q1KMD3 747 aaKnown RBP10.87□□□□□ -0.67
ZNF561-204ENST00000424629 LAMC3Q9Y6N6 1575 aa10.86□□□□□ -0.67
ZNF561-204ENST00000424629 TRIM26Q12899 539 aaPredicted RBP10.85□□□□□ -0.67
ZNF561-204ENST00000424629 CHMP7Q8WUX9 453 aaPredicted RBP10.84□□□□□ -0.67
ZNF561-204ENST00000424629 FANCD2Q9BXW9 1451 aa10.83□□□□□ -0.68
ZNF561-204ENST00000424629 NPM1P06748 294 aaKnown RBP eCLIP10.83□□□□□ -0.68
ZNF561-204ENST00000424629 CFTRP13569 1480 aa10.82□□□□□ -0.68
ZNF561-204ENST00000424629 RANGAP1P46060 587 aaPredicted RBP10.81□□□□□ -0.68
ZNF561-204ENST00000424629 FBLN2P98095 1184 aa10.81□□□□□ -0.68
ZNF561-204ENST00000424629 FHAD1B1AJZ9 1412 aa10.79□□□□□ -0.68
ZNF561-204ENST00000424629 TNIKQ9UKE5 1360 aa10.79□□□□□ -0.68
ZNF561-204ENST00000424629 SOGA1O94964 1423 aa10.78□□□□□ -0.68
ZNF561-204ENST00000424629 CUX2O14529 1486 aa10.77□□□□□ -0.69
ZNF561-204ENST00000424629 CARMIL2Q6F5E8 1435 aa10.76□□□□□ -0.69
ZNF561-204ENST00000424629 MRC2Q9UBG0 1479 aa10.75□□□□□ -0.69
ZNF561-204ENST00000424629 AEBP2Q6ZN18 517 aaPredicted RBP10.74□□□□□ -0.69
ZNF561-204ENST00000424629 CLIP1P30622 1438 aa10.73□□□□□ -0.69
ZNF561-204ENST00000424629 CARMIL1Q5VZK9 1371 aa10.72□□□□□ -0.69
ZNF561-204ENST00000424629 IFT140Q96RY7 1462 aa10.71□□□□□ -0.7
ZNF561-204ENST00000424629 DNMBPQ6XZF7 1577 aa10.69□□□□□ -0.7
ZNF561-204ENST00000424629 MYT1LQ9UL68 1186 aa10.69□□□□□ -0.7
ZNF561-204ENST00000424629 CCER1Q8TC90 406 aaPredicted RBP10.68□□□□□ -0.7
ZNF561-204ENST00000424629 RAPGEF2Q9Y4G8 1499 aa10.68□□□□□ -0.7
ZNF561-204ENST00000424629 FMN1Q68DA7 1419 aa10.67□□□□□ -0.7
ZNF561-204ENST00000424629 TOP2BQ02880 1626 aa10.63□□□□□ -0.71
ZNF561-204ENST00000424629 PCGF6Q9BYE7 350 aa10.63□□□□□ -0.71
ZNF561-204ENST00000424629 MTUS2Q5JR59 1369 aa10.62□□□□□ -0.71
ZNF561-204ENST00000424629 ERICH3Q5RHP9 1530 aa10.62□□□□□ -0.71
ZNF561-204ENST00000424629 CEP162Q5TB80 1403 aa10.61□□□□□ -0.71
ZNF561-204ENST00000424629 GRIN2BQ13224 1484 aa10.61□□□□□ -0.71
ZNF561-204ENST00000424629 FGD5Q6ZNL6 1462 aa10.61□□□□□ -0.71
ZNF561-204ENST00000424629 LOC105371045A0A1W2PR82 267 aa10.61□□□□□ -0.71
ZNF561-204ENST00000424629 WDR97A6NE52 1622 aa10.61□□□□□ -0.71
ZNF561-204ENST00000424629 GAPVD1Q14C86 1478 aa10.6□□□□□ -0.71
ZNF561-204ENST00000424629 PLEKHD1A6NEE1 506 aa10.59□□□□□ -0.71
ZNF561-204ENST00000424629 TTBK1Q5TCY1 1321 aaPredicted RBP10.57□□□□□ -0.72
ZNF561-204ENST00000424629 PELP1Q8IZL8 1130 aaKnown RBP10.57□□□□□ -0.72
ZNF561-204ENST00000424629 TOPBP1Q92547 1522 aa10.57□□□□□ -0.72
ZNF561-204ENST00000424629 FAM50AQ14320 339 aaKnown RBP10.56□□□□□ -0.72
ZNF561-204ENST00000424629 KIF21BO75037 1637 aa10.56□□□□□ -0.72
ZNF561-204ENST00000424629 PRDM2Q13029 1718 aa10.55□□□□□ -0.72
ZNF561-204ENST00000424629 CUL7Q14999 1698 aa10.55□□□□□ -0.72
ZNF561-204ENST00000424629 EFCAB5A4FU69 1503 aa10.53□□□□□ -0.72
ZNF561-204ENST00000424629 ABCA10Q8WWZ4 1543 aa10.52□□□□□ -0.72
ZNF561-204ENST00000424629 VPS8Q8N3P4 1428 aa10.52□□□□□ -0.73
ZNF561-204ENST00000424629 BIVM-ERCC5R4GMW8 1640 aa10.52□□□□□ -0.73
ZNF561-204ENST00000424629 TSPY4P0CV99 314 aa10.51□□□□□ -0.73
ZNF561-204ENST00000424629 TSPY10P0CW01 314 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms