RNA–Protein interactions for RNA: ENST00000331426.5

RBM43-201, Transcript of RNA binding motif protein 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RBM43, Length 4,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM43-201ENST00000331426 NISCHQ9Y2I1 1504 aa15.35■□□□□ 0.05
RBM43-201ENST00000331426 CCDC180Q9P1Z9 1646 aa13.61□□□□□ -0.23
RBM43-201ENST00000331426 CHIC1Q5VXU3 224 aa13□□□□□ -0.33
RBM43-201ENST00000331426 PELP1Q8IZL8 1130 aaKnown RBP13□□□□□ -0.33
RBM43-201ENST00000331426 DCAF8L2P0C7V8 631 aa12.97□□□□□ -0.33
RBM43-201ENST00000331426 ABCC9O60706 1549 aa12.91□□□□□ -0.34
RBM43-201ENST00000331426 MYO15BQ96JP2 1530 aa12.87□□□□□ -0.35
RBM43-201ENST00000331426 DCAF1Q9Y4B6 1507 aa12.87□□□□□ -0.35
RBM43-201ENST00000331426 NACADO15069 1562 aa12.84□□□□□ -0.35
RBM43-201ENST00000331426 ZCCHC6Q5VYS8 1495 aaKnown RBP12.82□□□□□ -0.36
RBM43-201ENST00000331426 RB1CC1Q8TDY2 1594 aa12.79□□□□□ -0.36
RBM43-201ENST00000331426 MYT1Q01538 1121 aa12.67□□□□□ -0.38
RBM43-201ENST00000331426 HRCP23327 699 aa12.66□□□□□ -0.38
RBM43-201ENST00000331426 PPARGC1BQ86YN6 1023 aaKnown RBP12.48□□□□□ -0.41
RBM43-201ENST00000331426 SHROOM4Q9ULL8 1493 aa12.46□□□□□ -0.41
RBM43-201ENST00000331426 PCGF6Q9BYE7 350 aa12.45□□□□□ -0.42
RBM43-201ENST00000331426 AEBP2Q6ZN18 517 aaPredicted RBP12.27□□□□□ -0.45
RBM43-201ENST00000331426 SCRIBQ14160 1630 aa12.26□□□□□ -0.45
RBM43-201ENST00000331426 SCAF1Q9H7N4 1312 aaKnown RBP12.18□□□□□ -0.46
RBM43-201ENST00000331426 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
RBM43-201ENST00000331426 SUPT5HO00267 1087 aaKnown RBP12.08□□□□□ -0.48
RBM43-201ENST00000331426 BAZ1AQ9NRL2 1556 aaPredicted RBP12.03□□□□□ -0.48
RBM43-201ENST00000331426 EHMT2Q96KQ7 1210 aa11.97□□□□□ -0.49
RBM43-201ENST00000331426 SMARCA2P51531 1590 aa11.94□□□□□ -0.5
RBM43-201ENST00000331426 ZEB1P37275 1124 aaPredicted RBP11.92□□□□□ -0.5
RBM43-201ENST00000331426 BICRAQ9NZM4 1560 aa11.91□□□□□ -0.5
RBM43-201ENST00000331426 CENPBP07199 599 aaPredicted RBP11.9□□□□□ -0.5
RBM43-201ENST00000331426 GTF3C3Q9Y5Q9 886 aa11.89□□□□□ -0.51
RBM43-201ENST00000331426 TTBK1Q5TCY1 1321 aaPredicted RBP11.88□□□□□ -0.51
RBM43-201ENST00000331426 UNC13AQ9UPW8 1703 aa11.86□□□□□ -0.51
RBM43-201ENST00000331426 ACIN1Q9UKV3 1341 aaKnown RBP11.86□□□□□ -0.51
RBM43-201ENST00000331426 SMARCA4P51532 1647 aa11.8□□□□□ -0.52
RBM43-201ENST00000331426 TRIM26Q12899 539 aaPredicted RBP11.8□□□□□ -0.52
RBM43-201ENST00000331426 BAZ1BQ9UIG0 1483 aaKnown RBP11.8□□□□□ -0.52
RBM43-201ENST00000331426 EIF4G1Q04637 1599 aaKnown RBP11.79□□□□□ -0.52
RBM43-201ENST00000331426 NEUROD1Q13562 356 aa11.79□□□□□ -0.52
RBM43-201ENST00000331426 SLC24A1O60721 1099 aa11.79□□□□□ -0.52
RBM43-201ENST00000331426 RSF1Q96T23 1441 aaPredicted RBP11.76□□□□□ -0.53
RBM43-201ENST00000331426 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
RBM43-201ENST00000331426 HMGXB3Q12766 1538 aa11.73□□□□□ -0.53
RBM43-201ENST00000331426 ATAD2BQ9ULI0 1458 aa11.72□□□□□ -0.53
RBM43-201ENST00000331426 BCL11AQ9H165 835 aa11.7□□□□□ -0.54
RBM43-201ENST00000331426 PEG3Q9GZU2 1588 aa11.7□□□□□ -0.54
RBM43-201ENST00000331426 CECR2Q9BXF3 1484 aa11.69□□□□□ -0.54
RBM43-201ENST00000331426 TOP2AP11388 1531 aaKnown RBP11.68□□□□□ -0.54
RBM43-201ENST00000331426 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
RBM43-201ENST00000331426 CC2D2AQ9P2K1 1620 aa11.62□□□□□ -0.55
RBM43-201ENST00000331426 YTHDC1Q96MU7 727 aaKnown RBP11.62□□□□□ -0.55
RBM43-201ENST00000331426 LOC105371045A0A1W2PR82 267 aa11.62□□□□□ -0.55
RBM43-201ENST00000331426 PDS5BQ9NTI5 1447 aa11.56□□□□□ -0.56
RBM43-201ENST00000331426 DIEXFQ68CQ4 756 aaKnown RBP11.55□□□□□ -0.56
RBM43-201ENST00000331426 PHF23Q9BUL5 403 aaPredicted RBP11.52□□□□□ -0.57
RBM43-201ENST00000331426 FAM9AQ8IZU1 332 aaPredicted RBP11.51□□□□□ -0.57
RBM43-201ENST00000331426 CADPSQ9ULU8 1353 aa11.49□□□□□ -0.57
RBM43-201ENST00000331426 CCER1Q8TC90 406 aaPredicted RBP11.49□□□□□ -0.57
RBM43-201ENST00000331426 ABCC8Q09428 1581 aa11.49□□□□□ -0.57
RBM43-201ENST00000331426 WIZO95785 1651 aa11.49□□□□□ -0.57
RBM43-201ENST00000331426 PRKCSHP14314 528 aaPredicted RBP11.46□□□□□ -0.58
RBM43-201ENST00000331426 LAMC3Q9Y6N6 1575 aa11.44□□□□□ -0.58
RBM43-201ENST00000331426 ERICH6Q7L0X2 663 aa11.43□□□□□ -0.58
RBM43-201ENST00000331426 ANP32EQ9BTT0 268 aa11.43□□□□□ -0.58
RBM43-201ENST00000331426 CCDC88BA6NC98 1476 aa11.43□□□□□ -0.58
RBM43-201ENST00000331426 ERCC6Q03468 1493 aa11.42□□□□□ -0.58
RBM43-201ENST00000331426 TRIM41Q8WV44 630 aa11.39□□□□□ -0.59
RBM43-201ENST00000331426 CFTRP13569 1480 aa11.37□□□□□ -0.59
RBM43-201ENST00000331426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.37□□□□□ -0.59
RBM43-201ENST00000331426 CEP164Q9UPV0 1460 aa11.36□□□□□ -0.59
RBM43-201ENST00000331426 CSRNP3Q8WYN3 585 aa11.31□□□□□ -0.6
RBM43-201ENST00000331426 EEA1Q15075 1411 aa11.3□□□□□ -0.6
RBM43-201ENST00000331426 FANCD2Q9BXW9 1451 aa11.29□□□□□ -0.6
RBM43-201ENST00000331426 WRNQ14191 1432 aaPredicted RBP eCLIP11.28□□□□□ -0.6
RBM43-201ENST00000331426 MRC2Q9UBG0 1479 aa11.25□□□□□ -0.61
RBM43-201ENST00000331426 DNAJC5BQ9UF47 199 aa11.24□□□□□ -0.61
RBM43-201ENST00000331426 PRDM2Q13029 1718 aa11.19□□□□□ -0.62
RBM43-201ENST00000331426 KIF27Q86VH2 1401 aa11.17□□□□□ -0.62
RBM43-201ENST00000331426 ZNF316A6NFI3 1004 aaPredicted RBP11.17□□□□□ -0.62
RBM43-201ENST00000331426 DNMBPQ6XZF7 1577 aa11.16□□□□□ -0.62
RBM43-201ENST00000331426 CUX2O14529 1486 aa11.16□□□□□ -0.62
RBM43-201ENST00000331426 PLPPR3Q6T4P5 718 aa11.15□□□□□ -0.62
RBM43-201ENST00000331426 IFT140Q96RY7 1462 aa11.15□□□□□ -0.62
RBM43-201ENST00000331426 MIER1Q8N108 512 aa11.13□□□□□ -0.63
RBM43-201ENST00000331426 WDR97A6NE52 1622 aa11.13□□□□□ -0.63
RBM43-201ENST00000331426 TSHZ2Q9NRE2 1034 aa11.13□□□□□ -0.63
RBM43-201ENST00000331426 SOGA1O94964 1423 aa11.12□□□□□ -0.63
RBM43-201ENST00000331426 BCANQ96GW7 911 aa11.1□□□□□ -0.63
RBM43-201ENST00000331426 SUPT16HQ9Y5B9 1047 aaKnown RBP11.09□□□□□ -0.63
RBM43-201ENST00000331426 TOPBP1Q92547 1522 aa11.08□□□□□ -0.64
RBM43-201ENST00000331426 TOP2BQ02880 1626 aa11.07□□□□□ -0.64
RBM43-201ENST00000331426 NESP48681 1621 aa11.06□□□□□ -0.64
RBM43-201ENST00000331426 WDR62O43379 1518 aa11.05□□□□□ -0.64
RBM43-201ENST00000331426 CLSPNQ9HAW4 1339 aa11.04□□□□□ -0.64
RBM43-201ENST00000331426 KCNA4P22459 653 aa11.02□□□□□ -0.64
RBM43-201ENST00000331426 FGD5Q6ZNL6 1462 aa11.02□□□□□ -0.64
RBM43-201ENST00000331426 BIVM-ERCC5R4GMW8 1640 aa11.02□□□□□ -0.65
RBM43-201ENST00000331426 UBTFP17480 764 aaKnown RBP11□□□□□ -0.65
RBM43-201ENST00000331426 APLP2Q06481 763 aa11□□□□□ -0.65
RBM43-201ENST00000331426 NEFLP07196 543 aa11□□□□□ -0.65
RBM43-201ENST00000331426 CHMP7Q8WUX9 453 aaPredicted RBP10.99□□□□□ -0.65
RBM43-201ENST00000331426 GRIN2BQ13224 1484 aa10.99□□□□□ -0.65
RBM43-201ENST00000331426 ABCA10Q8WWZ4 1543 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms