RNA–Protein interactions for RNA: ENST00000564999.5

TCF4-225, Transcript of transcription factor 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TCF4, Length 3,590 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-225ENST00000564999 CHIC1Q5VXU3 224 aa15.42■□□□□ 0.06
TCF4-225ENST00000564999 NISCHQ9Y2I1 1504 aa15.16■□□□□ 0.02
TCF4-225ENST00000564999 SLC24A1O60721 1099 aa15.1■□□□□ 0.01
TCF4-225ENST00000564999 EHMT2Q96KQ7 1210 aa14.89□□□□□ -0.03
TCF4-225ENST00000564999 AEBP2Q6ZN18 517 aaPredicted RBP14.84□□□□□ -0.03
TCF4-225ENST00000564999 PLPPR3Q6T4P5 718 aa14.37□□□□□ -0.11
TCF4-225ENST00000564999 PHF23Q9BUL5 403 aaPredicted RBP14.13□□□□□ -0.15
TCF4-225ENST00000564999 RTN4Q9NQC3 1192 aaKnown RBP14.05□□□□□ -0.16
TCF4-225ENST00000564999 KCNA4P22459 653 aa13.68□□□□□ -0.22
TCF4-225ENST00000564999 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
TCF4-225ENST00000564999 PRKCSHP14314 528 aaPredicted RBP13.5□□□□□ -0.25
TCF4-225ENST00000564999 CCDC180Q9P1Z9 1646 aa13.5□□□□□ -0.25
TCF4-225ENST00000564999 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
TCF4-225ENST00000564999 NCBP3Q53F19 620 aaKnown RBP13.3□□□□□ -0.28
TCF4-225ENST00000564999 DAXXQ9UER7 740 aaPredicted RBP13.25□□□□□ -0.29
TCF4-225ENST00000564999 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
TCF4-225ENST00000564999 TIMELESSQ9UNS1 1208 aa12.97□□□□□ -0.33
TCF4-225ENST00000564999 ADRA2BP18089 450 aa12.94□□□□□ -0.34
TCF4-225ENST00000564999 ZCCHC6Q5VYS8 1495 aaKnown RBP12.93□□□□□ -0.34
TCF4-225ENST00000564999 DCAF1Q9Y4B6 1507 aa12.88□□□□□ -0.35
TCF4-225ENST00000564999 TULP1O00294 542 aaPredicted RBP12.8□□□□□ -0.36
TCF4-225ENST00000564999 TAOK2Q9UL54 1235 aa12.77□□□□□ -0.37
TCF4-225ENST00000564999 ZBTB22O15209 634 aa12.73□□□□□ -0.37
TCF4-225ENST00000564999 TPRNQ4KMQ1 711 aa12.7□□□□□ -0.38
TCF4-225ENST00000564999 MYO15BQ96JP2 1530 aa12.67□□□□□ -0.38
TCF4-225ENST00000564999 ARXQ96QS3 562 aa12.53□□□□□ -0.4
TCF4-225ENST00000564999 HAP1P54257 671 aaPredicted RBP12.49□□□□□ -0.41
TCF4-225ENST00000564999 BCANQ96GW7 911 aa12.48□□□□□ -0.41
TCF4-225ENST00000564999 PLCB2Q00722 1185 aa12.45□□□□□ -0.42
TCF4-225ENST00000564999 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
TCF4-225ENST00000564999 PODXL2Q9NZ53 605 aa12.31□□□□□ -0.44
TCF4-225ENST00000564999 FKBP8Q14318 412 aa12.31□□□□□ -0.44
TCF4-225ENST00000564999 HOMEZQ8IX15 550 aa12.28□□□□□ -0.44
TCF4-225ENST00000564999 NPM3O75607 178 aaKnown RBP12.26□□□□□ -0.45
TCF4-225ENST00000564999 UNC13AQ9UPW8 1703 aa12.24□□□□□ -0.45
TCF4-225ENST00000564999 ABCC9O60706 1549 aa12.23□□□□□ -0.45
TCF4-225ENST00000564999 GTF3C3Q9Y5Q9 886 aa12.23□□□□□ -0.45
TCF4-225ENST00000564999 RANGAP1P46060 587 aaPredicted RBP12.23□□□□□ -0.45
TCF4-225ENST00000564999 APLP2Q06481 763 aa12.22□□□□□ -0.45
TCF4-225ENST00000564999 NACADO15069 1562 aa12.19□□□□□ -0.46
TCF4-225ENST00000564999 PPP6R1Q9UPN7 881 aa12.19□□□□□ -0.46
TCF4-225ENST00000564999 FBLN2P98095 1184 aa12.11□□□□□ -0.47
TCF4-225ENST00000564999 KDM2AQ9Y2K7 1162 aa12.09□□□□□ -0.47
TCF4-225ENST00000564999 DCAF8L2P0C7V8 631 aa12.09□□□□□ -0.47
TCF4-225ENST00000564999 SUPT5HO00267 1087 aaKnown RBP12□□□□□ -0.49
TCF4-225ENST00000564999 EIF4G1Q04637 1599 aaKnown RBP11.98□□□□□ -0.49
TCF4-225ENST00000564999 ERICH6Q7L0X2 663 aa11.97□□□□□ -0.49
TCF4-225ENST00000564999 TMEM132AQ24JP5 1023 aa11.94□□□□□ -0.5
TCF4-225ENST00000564999 C14orf37Q86TY3 774 aa11.94□□□□□ -0.5
TCF4-225ENST00000564999 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
TCF4-225ENST00000564999 PPP4R3CPQ6ZMV5 832 aa11.92□□□□□ -0.5
TCF4-225ENST00000564999 RB1CC1Q8TDY2 1594 aa11.89□□□□□ -0.51
TCF4-225ENST00000564999 SCRIBQ14160 1630 aa11.88□□□□□ -0.51
TCF4-225ENST00000564999 NPM2Q86SE8 214 aaKnown RBP11.88□□□□□ -0.51
TCF4-225ENST00000564999 BICRAQ9NZM4 1560 aa11.87□□□□□ -0.51
TCF4-225ENST00000564999 TRIM26Q12899 539 aaPredicted RBP11.84□□□□□ -0.51
TCF4-225ENST00000564999 PEG3Q9GZU2 1588 aa11.83□□□□□ -0.51
TCF4-225ENST00000564999 VSIG10Q8N0Z9 540 aa11.82□□□□□ -0.52
TCF4-225ENST00000564999 UBTFP17480 764 aaKnown RBP11.81□□□□□ -0.52
TCF4-225ENST00000564999 BAZ1AQ9NRL2 1556 aaPredicted RBP11.79□□□□□ -0.52
TCF4-225ENST00000564999 SHROOM4Q9ULL8 1493 aa11.76□□□□□ -0.53
TCF4-225ENST00000564999 SENP3Q9H4L4 574 aaPredicted RBP11.76□□□□□ -0.53
TCF4-225ENST00000564999 EIF5BO60841 1220 aaKnown RBP11.73□□□□□ -0.53
TCF4-225ENST00000564999 TTBK1Q5TCY1 1321 aaPredicted RBP11.72□□□□□ -0.53
TCF4-225ENST00000564999 RSF1Q96T23 1441 aaPredicted RBP11.71□□□□□ -0.53
TCF4-225ENST00000564999 FOXD4L1Q9NU39 408 aa11.71□□□□□ -0.54
TCF4-225ENST00000564999 SMARCA4P51532 1647 aa11.69□□□□□ -0.54
TCF4-225ENST00000564999 HRCP23327 699 aa11.66□□□□□ -0.54
TCF4-225ENST00000564999 MROH2BQ7Z745 1585 aa11.66□□□□□ -0.54
TCF4-225ENST00000564999 PLEKHG5O94827 1062 aa11.65□□□□□ -0.54
TCF4-225ENST00000564999 WIZO95785 1651 aa11.65□□□□□ -0.55
TCF4-225ENST00000564999 CFAP44Q96MT7 982 aa11.63□□□□□ -0.55
TCF4-225ENST00000564999 LOC105371045A0A1W2PR82 267 aa11.59□□□□□ -0.55
TCF4-225ENST00000564999 PAXIP1Q6ZW49 1069 aaPredicted RBP11.59□□□□□ -0.55
TCF4-225ENST00000564999 CECR2Q9BXF3 1484 aa11.58□□□□□ -0.56
TCF4-225ENST00000564999 TOP2AP11388 1531 aaKnown RBP11.58□□□□□ -0.56
TCF4-225ENST00000564999 TSHZ2Q9NRE2 1034 aa11.55□□□□□ -0.56
TCF4-225ENST00000564999 MYT1Q01538 1121 aa11.54□□□□□ -0.56
TCF4-225ENST00000564999 SMARCA2P51531 1590 aa11.52□□□□□ -0.57
TCF4-225ENST00000564999 PRDM2Q13029 1718 aa11.51□□□□□ -0.57
TCF4-225ENST00000564999 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
TCF4-225ENST00000564999 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
TCF4-225ENST00000564999 NBR1Q14596 966 aa11.43□□□□□ -0.58
TCF4-225ENST00000564999 ARID3AQ99856 593 aa11.42□□□□□ -0.58
TCF4-225ENST00000564999 PKD2Q13563 968 aa11.37□□□□□ -0.59
TCF4-225ENST00000564999 HMGXB3Q12766 1538 aa11.36□□□□□ -0.59
TCF4-225ENST00000564999 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
TCF4-225ENST00000564999 BIVM-ERCC5R4GMW8 1640 aa11.3□□□□□ -0.6
TCF4-225ENST00000564999 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.26□□□□□ -0.61
TCF4-225ENST00000564999 CCDC88BA6NC98 1476 aa11.26□□□□□ -0.61
TCF4-225ENST00000564999 IGSF3O75054 1194 aa11.24□□□□□ -0.61
TCF4-225ENST00000564999 ATAD2BQ9ULI0 1458 aa11.23□□□□□ -0.61
TCF4-225ENST00000564999 IFNLR1Q8IU57 520 aaPredicted RBP11.2□□□□□ -0.62
TCF4-225ENST00000564999 FOXD1Q16676 465 aa11.17□□□□□ -0.62
TCF4-225ENST00000564999 NCAPD3P42695 1498 aa11.17□□□□□ -0.62
TCF4-225ENST00000564999 TOP2BQ02880 1626 aa11.14□□□□□ -0.63
TCF4-225ENST00000564999 BBXQ8WY36 941 aaPredicted RBP11.13□□□□□ -0.63
TCF4-225ENST00000564999 SYNJ1O43426 1573 aa11.13□□□□□ -0.63
TCF4-225ENST00000564999 CHMP4AQ9BY43 222 aa11.11□□□□□ -0.63
TCF4-225ENST00000564999 KIF21BO75037 1637 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms