RNA–Protein interactions for RNA: ENST00000356768.8

PCYT1B-201, Transcript of phosphate cytidylyltransferase 1, choline, beta, humanhuman

TSL 1 (best) BASIC

Gene PCYT1B, Length 1,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1B-201ENST00000356768 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
PCYT1B-201ENST00000356768 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
PCYT1B-201ENST00000356768 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
PCYT1B-201ENST00000356768 PHF23Q9BUL5 403 aaPredicted RBP16.12■□□□□ 0.17
PCYT1B-201ENST00000356768 FOXD1Q16676 465 aa15.09■□□□□ 0.01
PCYT1B-201ENST00000356768 NISCHQ9Y2I1 1504 aa15.04■□□□□ -0
PCYT1B-201ENST00000356768 PLPPR3Q6T4P5 718 aa14.9□□□□□ -0.02
PCYT1B-201ENST00000356768 ADRA2BP18089 450 aa14.3□□□□□ -0.12
PCYT1B-201ENST00000356768 PPP6R1Q9UPN7 881 aa14.3□□□□□ -0.12
PCYT1B-201ENST00000356768 PIAS4Q8N2W9 510 aaPredicted RBP14.22□□□□□ -0.13
PCYT1B-201ENST00000356768 MSH5O43196 834 aa14.1□□□□□ -0.15
PCYT1B-201ENST00000356768 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.29
PCYT1B-201ENST00000356768 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
PCYT1B-201ENST00000356768 CCDC180Q9P1Z9 1646 aa13.19□□□□□ -0.3
PCYT1B-201ENST00000356768 PPP4R3CPQ6ZMV5 832 aa13.07□□□□□ -0.32
PCYT1B-201ENST00000356768 MAPK8IP2Q13387 824 aaPredicted RBP13.03□□□□□ -0.32
PCYT1B-201ENST00000356768 DMRT2Q9Y5R5 561 aa12.94□□□□□ -0.34
PCYT1B-201ENST00000356768 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
PCYT1B-201ENST00000356768 NCBP3Q53F19 620 aaKnown RBP12.73□□□□□ -0.37
PCYT1B-201ENST00000356768 ZCCHC6Q5VYS8 1495 aaKnown RBP12.7□□□□□ -0.38
PCYT1B-201ENST00000356768 RNF216Q9NWF9 866 aaPredicted RBP12.59□□□□□ -0.39
PCYT1B-201ENST00000356768 HOXD11P31277 338 aaPredicted RBP12.58□□□□□ -0.4
PCYT1B-201ENST00000356768 DCAF1Q9Y4B6 1507 aa12.52□□□□□ -0.4
PCYT1B-201ENST00000356768 NPM3O75607 178 aaKnown RBP12.46□□□□□ -0.41
PCYT1B-201ENST00000356768 KCNA4P22459 653 aa12.46□□□□□ -0.41
PCYT1B-201ENST00000356768 DCAF8L1A6NGE4 600 aa12.44□□□□□ -0.42
PCYT1B-201ENST00000356768 MYO15BQ96JP2 1530 aa12.33□□□□□ -0.44
PCYT1B-201ENST00000356768 SHROOM4Q9ULL8 1493 aa12.2□□□□□ -0.46
PCYT1B-201ENST00000356768 NACADO15069 1562 aa12.18□□□□□ -0.46
PCYT1B-201ENST00000356768 DCAF8L2P0C7V8 631 aa12.16□□□□□ -0.46
PCYT1B-201ENST00000356768 DNAJC5BQ9UF47 199 aa12.15□□□□□ -0.46
PCYT1B-201ENST00000356768 ABCC9O60706 1549 aa12.13□□□□□ -0.47
PCYT1B-201ENST00000356768 RB1CC1Q8TDY2 1594 aa12.04□□□□□ -0.48
PCYT1B-201ENST00000356768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.48
PCYT1B-201ENST00000356768 SCRIBQ14160 1630 aa12.01□□□□□ -0.49
PCYT1B-201ENST00000356768 RNF39Q9H2S5 420 aa12□□□□□ -0.49
PCYT1B-201ENST00000356768 CACNB1Q02641 598 aaPredicted RBP11.91□□□□□ -0.5
PCYT1B-201ENST00000356768 C1QBPQ07021 282 aaKnown RBP11.88□□□□□ -0.51
PCYT1B-201ENST00000356768 SLC4A1APQ9BWU0 796 aaKnown RBP11.87□□□□□ -0.51
PCYT1B-201ENST00000356768 UNC13AQ9UPW8 1703 aa11.86□□□□□ -0.51
PCYT1B-201ENST00000356768 SLC4A2P04920 1241 aa11.79□□□□□ -0.52
PCYT1B-201ENST00000356768 SUPT5HO00267 1087 aaKnown RBP11.78□□□□□ -0.52
PCYT1B-201ENST00000356768 U3KPZ7 1027 aaPredicted RBP11.76□□□□□ -0.53
PCYT1B-201ENST00000356768 EHMT2Q96KQ7 1210 aa11.69□□□□□ -0.54
PCYT1B-201ENST00000356768 RSF1Q96T23 1441 aaPredicted RBP11.68□□□□□ -0.54
PCYT1B-201ENST00000356768 BICRAQ9NZM4 1560 aa11.65□□□□□ -0.54
PCYT1B-201ENST00000356768 BAZ1AQ9NRL2 1556 aaPredicted RBP11.64□□□□□ -0.55
PCYT1B-201ENST00000356768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.63□□□□□ -0.55
PCYT1B-201ENST00000356768 HNRNPUL2Q1KMD3 747 aaKnown RBP11.63□□□□□ -0.55
PCYT1B-201ENST00000356768 CECR2Q9BXF3 1484 aa11.6□□□□□ -0.55
PCYT1B-201ENST00000356768 APLP2Q06481 763 aa11.6□□□□□ -0.55
PCYT1B-201ENST00000356768 MROH2BQ7Z745 1585 aa11.59□□□□□ -0.55
PCYT1B-201ENST00000356768 FOXD4L1Q9NU39 408 aa11.58□□□□□ -0.56
PCYT1B-201ENST00000356768 SMARCA4P51532 1647 aa11.57□□□□□ -0.56
PCYT1B-201ENST00000356768 MYCNP04198 464 aaPredicted RBP11.57□□□□□ -0.56
PCYT1B-201ENST00000356768 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
PCYT1B-201ENST00000356768 WIZO95785 1651 aa11.53□□□□□ -0.56
PCYT1B-201ENST00000356768 CAPN15O75808 1086 aa11.52□□□□□ -0.57
PCYT1B-201ENST00000356768 SPINK5Q9NQ38 1064 aaPredicted RBP11.48□□□□□ -0.57
PCYT1B-201ENST00000356768 CSRNP3Q8WYN3 585 aa11.47□□□□□ -0.57
PCYT1B-201ENST00000356768 PEG3Q9GZU2 1588 aa11.46□□□□□ -0.57
PCYT1B-201ENST00000356768 TOP2AP11388 1531 aaKnown RBP11.45□□□□□ -0.58
PCYT1B-201ENST00000356768 ZNF219Q9P2Y4 722 aaPredicted RBP11.42□□□□□ -0.58
PCYT1B-201ENST00000356768 ZBTB22O15209 634 aa11.41□□□□□ -0.58
PCYT1B-201ENST00000356768 TRHP20396 242 aaPredicted RBP11.39□□□□□ -0.59
PCYT1B-201ENST00000356768 PABPN1Q86U42 306 aaKnown RBP eCLIP11.38□□□□□ -0.59
PCYT1B-201ENST00000356768 SMARCA2P51531 1590 aa11.35□□□□□ -0.59
PCYT1B-201ENST00000356768 EIF4G1Q04637 1599 aaKnown RBP11.35□□□□□ -0.59
PCYT1B-201ENST00000356768 DSG3P32926 999 aa11.33□□□□□ -0.6
PCYT1B-201ENST00000356768 ATAD2BQ9ULI0 1458 aa11.29□□□□□ -0.6
PCYT1B-201ENST00000356768 CCDC88BA6NC98 1476 aa11.26□□□□□ -0.61
PCYT1B-201ENST00000356768 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
PCYT1B-201ENST00000356768 BAZ1BQ9UIG0 1483 aaKnown RBP11.25□□□□□ -0.61
PCYT1B-201ENST00000356768 ABCB7O75027 752 aa11.24□□□□□ -0.61
PCYT1B-201ENST00000356768 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
PCYT1B-201ENST00000356768 NCAPD3P42695 1498 aa11.19□□□□□ -0.62
PCYT1B-201ENST00000356768 ATF5Q9Y2D1 282 aaPredicted RBP11.18□□□□□ -0.62
PCYT1B-201ENST00000356768 POLA2Q14181 598 aa11.14□□□□□ -0.63
PCYT1B-201ENST00000356768 TRIM41Q8WV44 630 aa11.13□□□□□ -0.63
PCYT1B-201ENST00000356768 PRDM2Q13029 1718 aa11.11□□□□□ -0.63
PCYT1B-201ENST00000356768 ABCC8Q09428 1581 aa11.07□□□□□ -0.64
PCYT1B-201ENST00000356768 CC2D2AQ9P2K1 1620 aa11.07□□□□□ -0.64
PCYT1B-201ENST00000356768 ZBTB12Q9Y330 459 aaPredicted RBP11.01□□□□□ -0.65
PCYT1B-201ENST00000356768 WRNQ14191 1432 aaPredicted RBP eCLIP11□□□□□ -0.65
PCYT1B-201ENST00000356768 BIVM-ERCC5R4GMW8 1640 aa10.99□□□□□ -0.65
PCYT1B-201ENST00000356768 EEA1Q15075 1411 aa10.98□□□□□ -0.65
PCYT1B-201ENST00000356768 CFTRP13569 1480 aa10.98□□□□□ -0.65
PCYT1B-201ENST00000356768 SYNJ1O43426 1573 aa10.98□□□□□ -0.65
PCYT1B-201ENST00000356768 TOP2BQ02880 1626 aa10.96□□□□□ -0.65
PCYT1B-201ENST00000356768 LOC105371045A0A1W2PR82 267 aa10.9□□□□□ -0.66
PCYT1B-201ENST00000356768 RBM42Q9BTD8 480 aaKnown RBP10.89□□□□□ -0.67
PCYT1B-201ENST00000356768 CADPSQ9ULU8 1353 aa10.87□□□□□ -0.67
PCYT1B-201ENST00000356768 FBLN2P98095 1184 aa10.86□□□□□ -0.67
PCYT1B-201ENST00000356768 KIF21BO75037 1637 aa10.86□□□□□ -0.67
PCYT1B-201ENST00000356768 CUX1P39880 1505 aa10.85□□□□□ -0.67
PCYT1B-201ENST00000356768 SOGA1O94964 1423 aa10.84□□□□□ -0.67
PCYT1B-201ENST00000356768 FAM9AQ8IZU1 332 aaPredicted RBP10.84□□□□□ -0.67
PCYT1B-201ENST00000356768 LAMC3Q9Y6N6 1575 aa10.84□□□□□ -0.67
PCYT1B-201ENST00000356768 GOLGA3Q08378 1498 aa10.8□□□□□ -0.68
PCYT1B-201ENST00000356768 CEP164Q9UPV0 1460 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms