Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 AC096631.2-201ENST00000436136 790 ntBASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 AC010141.2-201ENST00000452426 721 ntBASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF556Q9HAH1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 MIR939-201ENST00000401314 82 ntBASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 AC007322.3-201ENST00000426526 701 ntBASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 AF213884.3-201ENST00000563833 479 ntBASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 AC093484.2-201ENST00000580996 2166 ntBASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF556Q9HAH1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 DUX4L2-201ENST00000561772 1275 ntBASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 DUX4L6-201ENST00000626483 1275 ntBASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 DUX4L1-201ENST00000627662 1275 ntBASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 DUX4L8-201ENST00000629013 1275 ntBASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 DUX4L3-201ENST00000630187 1275 ntBASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 DUX4L7-201ENST00000630678 1275 ntBASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 DUX4L5-201ENST00000630834 1275 ntBASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ZNF556Q9HAH1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF556Q9HAH1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ZNF556Q9HAH1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF556Q9HAH1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ZNF556Q9HAH1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.4■□□□□ 0.54
ZNF556Q9HAH1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF556Q9HAH1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ZNF556Q9HAH1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF556Q9HAH1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF556Q9HAH1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF556Q9HAH1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF556Q9HAH1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF556Q9HAH1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF556Q9HAH1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms