Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 AC092368.3-202ENST00000574180 1591 ntBASIC21.06■□□□□ 0.96
LHX5Q9H2C1 AC009237.14-201ENST00000609975 1594 ntBASIC21.06■□□□□ 0.96
LHX5Q9H2C1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LHX5Q9H2C1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LHX5Q9H2C1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.05■□□□□ 0.96
LHX5Q9H2C1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LHX5Q9H2C1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LHX5Q9H2C1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.05■□□□□ 0.96
LHX5Q9H2C1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LHX5Q9H2C1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LHX5Q9H2C1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.05■□□□□ 0.96
LHX5Q9H2C1 PNMA6B-201ENST00000538162 1200 ntBASIC21.05■□□□□ 0.96
LHX5Q9H2C1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
LHX5Q9H2C1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.05■□□□□ 0.96
LHX5Q9H2C1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LHX5Q9H2C1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
LHX5Q9H2C1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 PHGDH-210ENST00000641115 1638 ntBASIC21.04■□□□□ 0.96
LHX5Q9H2C1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.04■□□□□ 0.96
LHX5Q9H2C1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LHX5Q9H2C1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 AP001271.2-201ENST00000624018 1556 ntBASIC21.03■□□□□ 0.96
LHX5Q9H2C1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 AC006557.6-201ENST00000623071 864 ntBASIC21.03■□□□□ 0.96
LHX5Q9H2C1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX5Q9H2C1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 PCDHAC2-203ENST00000615316 3011 ntBASIC21.02■□□□□ 0.96
LHX5Q9H2C1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.02■□□□□ 0.96
LHX5Q9H2C1 SLC25A24-204ENST00000569674 2357 ntBASIC21.02■□□□□ 0.96
LHX5Q9H2C1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LHX5Q9H2C1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX5Q9H2C1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms