Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 AL050303.2-201ENST00000619798 666 ntBASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 AC116562.4-201ENST00000641316 2276 ntBASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUCKS1Q9H1E3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NUCKS1Q9H1E3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NUCKS1Q9H1E3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NUCKS1Q9H1E3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NUCKS1Q9H1E3 AC009237.14-201ENST00000609975 1594 ntBASIC21.58■■□□□ 1.05
NUCKS1Q9H1E3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NUCKS1Q9H1E3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.58■■□□□ 1.05
NUCKS1Q9H1E3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.58■■□□□ 1.05
NUCKS1Q9H1E3 AC005181.1-201ENST00000604782 1256 ntBASIC21.58■■□□□ 1.05
NUCKS1Q9H1E3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
NUCKS1Q9H1E3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NUCKS1Q9H1E3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
NUCKS1Q9H1E3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NUCKS1Q9H1E3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NUCKS1Q9H1E3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.58■■□□□ 1.04
NUCKS1Q9H1E3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.58■■□□□ 1.04
NUCKS1Q9H1E3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.58■■□□□ 1.04
NUCKS1Q9H1E3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NUCKS1Q9H1E3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NUCKS1Q9H1E3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 BX323043.1-201ENST00000641006 1765 ntBASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.57■■□□□ 1.04
NUCKS1Q9H1E3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 KRT8P17-201ENST00000453110 1448 ntBASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 PTBP1P-201ENST00000554374 1601 ntBASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 MCRIP2P1-201ENST00000394346 511 ntBASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 TREX1-205ENST00000625293 1783 ntBASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUCKS1Q9H1E3 AC068338.2-201ENST00000563278 1430 ntBASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms