Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
RTBDNQ9BSG5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.51■□□□□ 0.23
RTBDNQ9BSG5 AL358852.1-201ENST00000623174 1268 ntBASIC16.51■□□□□ 0.23
RTBDNQ9BSG5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTBDNQ9BSG5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTBDNQ9BSG5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.51■□□□□ 0.23
RTBDNQ9BSG5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RTBDNQ9BSG5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTBDNQ9BSG5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTBDNQ9BSG5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RTBDNQ9BSG5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.51■□□□□ 0.23
RTBDNQ9BSG5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTBDNQ9BSG5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTBDNQ9BSG5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.51■□□□□ 0.23
RTBDNQ9BSG5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 LETM1P2-201ENST00000597330 2178 ntBASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 RASA4CP-201ENST00000424092 1398 ntBASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTBDNQ9BSG5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 AC005082.1-201ENST00000413042 2259 ntBASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 AP001330.3-201ENST00000520123 633 ntBASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 AL354811.1-201ENST00000610286 706 ntBASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
RTBDNQ9BSG5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 AC243732.1-201ENST00000612648 864 ntBASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTBDNQ9BSG5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms