Protein–RNA interactions for Protein: Q96JQ0

DCHS1, Protocadherin-16, humanhuman

Predictions only

Length 3,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS1Q96JQ0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
DCHS1Q96JQ0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DCHS1Q96JQ0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DCHS1Q96JQ0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
DCHS1Q96JQ0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.21■□□□□ 0.67
DCHS1Q96JQ0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.21■□□□□ 0.67
DCHS1Q96JQ0 AC141257.4-201ENST00000634557 245 ntBASIC19.21■□□□□ 0.67
DCHS1Q96JQ0 AC136944.6-201ENST00000634818 245 ntBASIC19.21■□□□□ 0.67
DCHS1Q96JQ0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DCHS1Q96JQ0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
DCHS1Q96JQ0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 AC010653.2-201ENST00000623505 997 ntBASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCHS1Q96JQ0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 HLA-A-201ENST00000376802 1334 ntBASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 BX640515.1-201ENST00000617215 977 ntBASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.19■□□□□ 0.66
DCHS1Q96JQ0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCHS1Q96JQ0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 AC004951.3-201ENST00000418645 1148 ntBASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 YBX1P10-201ENST00000444752 975 ntBASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 KRT8P8-201ENST00000434750 1448 ntBASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 MIR1233-2-201ENST00000408138 82 ntBASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 MIR1233-1-201ENST00000408722 82 ntBASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 AC092329.2-201ENST00000598402 547 ntBASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DCHS1Q96JQ0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DCHS1Q96JQ0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DCHS1Q96JQ0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.16■□□□□ 0.66
DCHS1Q96JQ0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.16■□□□□ 0.66
DCHS1Q96JQ0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DCHS1Q96JQ0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
DCHS1Q96JQ0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DCHS1Q96JQ0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms