Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 NOC2LP1-202ENST00000452600 2235 ntBASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 KRT87P-202ENST00000534226 1464 ntBASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB1Q8WWH5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 TPRG1LP1-201ENST00000598702 760 ntBASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRUB1Q8WWH5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB1Q8WWH5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRUB1Q8WWH5 PCDHB18P-201ENST00000524813 2368 ntBASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 Z82202.1-201ENST00000623446 1880 ntBASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 AP000997.3-201ENST00000623333 2250 ntBASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.2■□□□□ 0.5
TRUB1Q8WWH5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms