Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 IGHV3-19-201ENST00000521488 291 ntBASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.02■□□□□ 0.32
SMIM4Q8WVI0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.02■□□□□ 0.31
SMIM4Q8WVI0 KRT16P2-201ENST00000414673 1423 ntBASIC17.02■□□□□ 0.31
SMIM4Q8WVI0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMIM4Q8WVI0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
SMIM4Q8WVI0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMIM4Q8WVI0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SMIM4Q8WVI0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SMIM4Q8WVI0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMIM4Q8WVI0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SMIM4Q8WVI0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMIM4Q8WVI0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17■□□□□ 0.31
SMIM4Q8WVI0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SMIM4Q8WVI0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17■□□□□ 0.31
SMIM4Q8WVI0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17■□□□□ 0.31
SMIM4Q8WVI0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17■□□□□ 0.31
SMIM4Q8WVI0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17■□□□□ 0.31
SMIM4Q8WVI0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17■□□□□ 0.31
SMIM4Q8WVI0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 AC105233.4-201ENST00000642045 216 ntBASIC17■□□□□ 0.31
SMIM4Q8WVI0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17■□□□□ 0.31
SMIM4Q8WVI0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17■□□□□ 0.31
SMIM4Q8WVI0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMIM4Q8WVI0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SMIM4Q8WVI0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
SMIM4Q8WVI0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms