Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AL031963.3-201ENST00000606441 850 ntBASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 AC069544.1-201ENST00000609399 999 ntBASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 KRT8P20-201ENST00000423953 1409 ntBASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH20Q8N6Y1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDH20Q8N6Y1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDH20Q8N6Y1 DPP3P2-201ENST00000416030 1696 ntBASIC20.33■□□□□ 0.85
PCDH20Q8N6Y1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH20Q8N6Y1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH20Q8N6Y1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH20Q8N6Y1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDH20Q8N6Y1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH20Q8N6Y1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH20Q8N6Y1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDH20Q8N6Y1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH20Q8N6Y1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PCDH20Q8N6Y1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.33■□□□□ 0.84
PCDH20Q8N6Y1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDH20Q8N6Y1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.33■□□□□ 0.84
PCDH20Q8N6Y1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH20Q8N6Y1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 KRT8P17-201ENST00000453110 1448 ntBASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 AC098590.1-201ENST00000468126 897 ntBASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
PCDH20Q8N6Y1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH20Q8N6Y1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms