Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC149Q6ZUS6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21■□□□□ 0.95
CCDC149Q6ZUS6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21■□□□□ 0.95
CCDC149Q6ZUS6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC149Q6ZUS6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21■□□□□ 0.95
CCDC149Q6ZUS6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21■□□□□ 0.95
CCDC149Q6ZUS6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC149Q6ZUS6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC149Q6ZUS6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC149Q6ZUS6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21■□□□□ 0.95
CCDC149Q6ZUS6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 PLK5-205ENST00000642079 1969 ntBASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 AP000525.1-201ENST00000608286 694 ntBASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CCDC149Q6ZUS6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 AL121603.2-201ENST00000557373 2117 ntBASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 REXO1L10P-201ENST00000615707 1290 ntBASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 AC079598.2-202ENST00000546624 1451 ntBASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC149Q6ZUS6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 AC005521.1-201ENST00000393351 872 ntBASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 MIR1238-201ENST00000408483 83 ntBASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
CCDC149Q6ZUS6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC149Q6ZUS6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC149Q6ZUS6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC149Q6ZUS6 KRT8P9-201ENST00000558927 1449 ntBASIC20.96■□□□□ 0.95
CCDC149Q6ZUS6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC149Q6ZUS6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC149Q6ZUS6 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC149Q6ZUS6 AC113347.1-201ENST00000413321 391 ntBASIC20.96■□□□□ 0.95
CCDC149Q6ZUS6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC149Q6ZUS6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC149Q6ZUS6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC149Q6ZUS6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC149Q6ZUS6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC149Q6ZUS6 LINC01568-207ENST00000641790 1380 ntBASIC20.96■□□□□ 0.95
CCDC149Q6ZUS6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC149Q6ZUS6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms