Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.025e-7■■□□□ 14
SRSF1Q07955 AC087633.2-204ENST00000621842 496 ntTSL 58.65□□□□□ -1.025e-7■■□□□ 14
SRSF1Q07955 AP1G2-219ENST00000555789 318 ntTSL 38.31□□□□□ -1.081e-10■■□□□ 14
SRSF1Q07955 TPCN1-202ENST00000392569 2558 ntTSL 2 BASIC8.26□□□□□ -1.095e-7■■□□□ 14
SRSF1Q07955 AP1G2-215ENST00000554977 569 ntTSL 47.9□□□□□ -1.141e-10■■□□□ 14
SRSF1Q07955 ACACA-245ENST00000619546 5315 ntTSL 1 (best)7.6□□□□□ -1.195e-7■■□□□ 14
SRSF1Q07955 AP1G2-221ENST00000555974 349 ntTSL 37.52□□□□□ -1.211e-10■■□□□ 14
SRSF1Q07955 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC7.06□□□□□ -1.285e-7■■□□□ 14
SRSF1Q07955 TMEM245-202ENST00000413712 1973 ntTSL 26.78□□□□□ -1.325e-7■■□□□ 14
SRSF1Q07955 AC087633.2-206ENST00000614581 513 ntTSL 56.63□□□□□ -1.355e-7■■□□□ 14
SRSF1Q07955 ACACA-244ENST00000619245 635 ntTSL 36.28□□□□□ -1.45e-7■■□□□ 14
SRSF1Q07955 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.2□□□□□ -1.425e-7■■□□□ 14
SRSF1Q07955 TMEM245-205ENST00000491854 2435 ntTSL 25.95□□□□□ -1.465e-7■■□□□ 14
SRSF1Q07955 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.44□□□□□ -1.545e-7■■□□□ 14
SRSF1Q07955 AC087633.2-205ENST00000615751 500 ntTSL 55.08□□□□□ -1.65e-7■■□□□ 14
SRSF1Q07955 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.07□□□□□ -1.65e-7■■□□□ 14
SRSF1Q07955 MARS-226ENST00000551892 748 ntTSL 319.17■□□□□ 0.666e-8■■□□□ 14
SRSF1Q07955 ITGA5-207ENST00000551564 354 ntTSL 318.49■□□□□ 0.556e-8■■□□□ 14
SRSF1Q07955 MARS-223ENST00000551431 559 ntTSL 418.32■□□□□ 0.526e-8■■□□□ 14
SRSF1Q07955 MARS-217ENST00000549074 532 ntTSL 418.32■□□□□ 0.526e-8■■□□□ 14
SRSF1Q07955 MARS-213ENST00000548674 749 ntTSL 514.91□□□□□ -0.026e-8■■□□□ 14
SRSF1Q07955 ARID4B-207ENST00000462969 273 ntTSL 214.55□□□□□ -0.086e-8■■□□□ 14
SRSF1Q07955 ITGA5-211ENST00000552564 4996 ntTSL 211.75□□□□□ -0.536e-8■■□□□ 14
SRSF1Q07955 MARS-228ENST00000552371 699 ntTSL 311.07□□□□□ -0.646e-8■■□□□ 14
SRSF1Q07955 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.726e-8■■□□□ 14
SRSF1Q07955 FRRS1-204ENST00000492943 440 ntTSL 55.01□□□□□ -1.616e-8■■□□□ 14
SRSF1Q07955 HNRNPM-204ENST00000594907 1078 ntTSL 518.35■□□□□ 0.532e-10■■□□□ 14
SRSF1Q07955 HNRNPM-213ENST00000600092 1086 ntTSL 217.49■□□□□ 0.392e-10■■□□□ 14
SRSF1Q07955 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.79□□□□□ -0.525e-7■■□□□ 14
SRSF1Q07955 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC11.33□□□□□ -0.595e-7■■□□□ 14
SRSF1Q07955 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.09□□□□□ -0.635e-7■■□□□ 14
SRSF1Q07955 ATP6V0A1-205ENST00000544137 3047 ntTSL 1 (best) BASIC8.83□□□□□ -15e-7■■□□□ 14
SRSF1Q07955 ATP6V0A1-222ENST00000589727 664 ntTSL 57.98□□□□□ -1.135e-7■■□□□ 14
SRSF1Q07955 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.165e-7■■□□□ 14
SRSF1Q07955 ATP6V0A1-212ENST00000587375 546 ntTSL 47.77□□□□□ -1.175e-7■■□□□ 14
SRSF1Q07955 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.25e-7■■□□□ 14
SRSF1Q07955 ATP6V0A1-208ENST00000586001 587 ntTSL 36.7□□□□□ -1.345e-7■■□□□ 14
SRSF1Q07955 ATP6V0A1-224ENST00000592324 585 ntTSL 45.96□□□□□ -1.465e-7■■□□□ 14
SRSF1Q07955 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.84■■□□□ 1.898e-6■■□□□ 14
SRSF1Q07955 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.728e-6■■□□□ 14
SRSF1Q07955 NT5DC2-209ENST00000478091 590 ntTSL 317.55■□□□□ 0.48e-6■■□□□ 14
SRSF1Q07955 NT5DC2-206ENST00000466112 887 ntTSL 215.7■□□□□ 0.18e-6■■□□□ 14
SRSF1Q07955 NT5DC2-213ENST00000489316 772 ntTSL 514.69□□□□□ -0.068e-6■■□□□ 14
SRSF1Q07955 NT5DC2-215ENST00000492555 2004 ntTSL 1 (best)13.91□□□□□ -0.188e-6■■□□□ 14
SRSF1Q07955 NT5DC2-205ENST00000463947 670 ntTSL 312.99□□□□□ -0.338e-6■■□□□ 14
SRSF1Q07955 NT5DC2-201ENST00000307076 2047 ntAPPRIS P3 TSL 2 BASIC10.24□□□□□ -0.778e-6■■□□□ 14
SRSF1Q07955 PCED1A-204ENST00000448755 1170 ntTSL 318.07■□□□□ 0.485e-7■■□□□ 14
SRSF1Q07955 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.235e-7■■□□□ 14
SRSF1Q07955 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.13■□□□□ 0.175e-7■■□□□ 14
SRSF1Q07955 PCED1A-203ENST00000439542 1187 ntTSL 215.41■□□□□ 0.065e-7■■□□□ 14
SRSF1Q07955 SUGP2-204ENST00000593795 747 ntTSL 513.12□□□□□ -0.312e-10■■□□□ 14
SRSF1Q07955 AC004967.1-201ENST00000453589 447 ntBASIC16.71■□□□□ 0.272e-8■■□□□ 14
SRSF1Q07955 ARID3A-205ENST00000587532 1016 ntTSL 518.19■□□□□ 0.51e-12■■□□□ 14
SRSF1Q07955 ARID3A-202ENST00000457152 549 ntTSL 512.98□□□□□ -0.333e-8■■□□□ 14
SRSF1Q07955 RTN4-214ENST00000486085 955 ntTSL 36.32□□□□□ -1.46e-8■■□□□ 14
SRSF1Q07955 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.56e-8■■□□□ 14
SRSF1Q07955 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.35□□□□□ -1.556e-8■■□□□ 14
SRSF1Q07955 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.94□□□□□ -1.946e-8■■□□□ 14
SRSF1Q07955 ARAP1-221ENST00000546293 702 ntTSL 315.83■□□□□ 0.127e-8■■□□□ 14
SRSF1Q07955 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.965e-8■■□□□ 14
SRSF1Q07955 CYC1-204ENST00000533444 1832 ntTSL 1 (best)20.9■□□□□ 0.945e-8■■□□□ 14
SRSF1Q07955 DSN1-206ENST00000447406 1146 ntTSL 518.01■□□□□ 0.475e-8■■□□□ 14
SRSF1Q07955 MON1B-210ENST00000569610 611 ntTSL 417.6■□□□□ 0.413e-6■■□□□ 14
SRSF1Q07955 MON1B-209ENST00000567291 1110 ntTSL 317.6■□□□□ 0.413e-6■■□□□ 14
SRSF1Q07955 MON1B-208ENST00000566963 915 ntTSL 217.36■□□□□ 0.373e-6■■□□□ 14
SRSF1Q07955 CYC1-203ENST00000528618 831 ntTSL 516.78■□□□□ 0.285e-8■■□□□ 14
SRSF1Q07955 DSN1-210ENST00000492703 726 ntTSL 516.07■□□□□ 0.165e-8■■□□□ 14
SRSF1Q07955 MON1B-205ENST00000563612 877 ntTSL 215.07■□□□□ 03e-6■■□□□ 14
SRSF1Q07955 MON1B-206ENST00000564006 948 ntTSL 215.07■□□□□ 03e-6■■□□□ 14
SRSF1Q07955 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.83□□□□□ -0.033e-6■■□□□ 14
SRSF1Q07955 MON1B-204ENST00000563279 576 ntTSL 414.82□□□□□ -0.043e-6■■□□□ 14
SRSF1Q07955 DSN1-205ENST00000438549 631 ntTSL 514.61□□□□□ -0.075e-8■■□□□ 14
SRSF1Q07955 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.64□□□□□ -0.233e-6■■□□□ 14
SRSF1Q07955 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.385e-8■■□□□ 14
SRSF1Q07955 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.65e-8■■□□□ 14
SRSF1Q07955 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.615e-8■■□□□ 14
SRSF1Q07955 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.643e-6■■□□□ 14
SRSF1Q07955 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.645e-8■■□□□ 14
SRSF1Q07955 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC10.76□□□□□ -0.695e-8■■□□□ 14
SRSF1Q07955 DSN1-208ENST00000473615 2075 ntTSL 29.47□□□□□ -0.895e-8■■□□□ 14
SRSF1Q07955 DSN1-202ENST00000373740 1922 ntAPPRIS ALT2 TSL 3 BASIC9.25□□□□□ -0.935e-8■■□□□ 14
SRSF1Q07955 DSN1-209ENST00000480153 2447 ntTSL 1 (best)8.84□□□□□ -0.995e-8■■□□□ 14
SRSF1Q07955 FUS-203ENST00000474990 827 ntTSL 321.84■■□□□ 1.091e-8■■□□□ 13.9
SRSF1Q07955 HNRNPM-207ENST00000597081 1004 ntTSL 520.34■□□□□ 0.855e-13■■□□□ 13.9
SRSF1Q07955 HNRNPM-208ENST00000597270 1147 ntTSL 219.83■□□□□ 0.775e-13■■□□□ 13.9
SRSF1Q07955 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.594e-7■■□□□ 13.9
SRSF1Q07955 COL9A2-207ENST00000482722 2887 ntTSL 1 (best)11.11□□□□□ -0.634e-7■■□□□ 13.9
SRSF1Q07955 NUP98-214ENST00000527104 705 ntTSL 37.77□□□□□ -1.175e-10■■□□□ 13.9
SRSF1Q07955 COL27A1-206ENST00000490831 666 ntTSL 314.27□□□□□ -0.134e-8■■□□□ 13.9
SRSF1Q07955 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.96■□□□□ 0.958e-9■■□□□ 13.9
SRSF1Q07955 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.428e-9■■□□□ 13.9
SRSF1Q07955 TTLL3-227ENST00000482269 882 ntTSL 215.97■□□□□ 0.156e-7■■□□□ 13.9
SRSF1Q07955 TTLL3-229ENST00000492440 1549 ntTSL 212.69□□□□□ -0.386e-7■■□□□ 13.9
SRSF1Q07955 TTLL3-223ENST00000466245 616 ntTSL 310.1□□□□□ -0.796e-7■■□□□ 13.9
SRSF1Q07955 GABRE-203ENST00000441219 1324 ntTSL 29.6□□□□□ -0.879e-7■■□□□ 13.9
SRSF1Q07955 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC7.49□□□□□ -1.214e-11■■□□□ 13.9
SRSF1Q07955 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC6.87□□□□□ -1.314e-11■■□□□ 13.9
SRSF1Q07955 MARCH6-210ENST00000511802 4734 ntTSL 26.15□□□□□ -1.424e-11■■□□□ 13.9
SRSF1Q07955 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.484e-11■■□□□ 13.9
SRSF1Q07955 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.583e-8■■□□□ 13.9
Retrieved 100 of 14,836 protein–RNA pairs in 93.8 ms