RNA–Protein interactions for RNA: ENST00000589727.5

ATP6V0A1-222, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 5

Gene ATP6V0A1, Length 664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-222ENST00000589727 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
ATP6V0A1-222ENST00000589727 CHIC1Q5VXU3 224 aa25.26■■□□□ 1.63
ATP6V0A1-222ENST00000589727 SENP3Q9H4L4 574 aaPredicted RBP22.42■■□□□ 1.18
ATP6V0A1-222ENST00000589727 PHF23Q9BUL5 403 aaPredicted RBP22.17■■□□□ 1.14
ATP6V0A1-222ENST00000589727 FOXD1Q16676 465 aa20.85■□□□□ 0.93
ATP6V0A1-222ENST00000589727 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.85
ATP6V0A1-222ENST00000589727 PPP6R1Q9UPN7 881 aa19.72■□□□□ 0.75
ATP6V0A1-222ENST00000589727 ADRA2BP18089 450 aa19.69■□□□□ 0.74
ATP6V0A1-222ENST00000589727 PIAS4Q8N2W9 510 aaPredicted RBP19.58■□□□□ 0.72
ATP6V0A1-222ENST00000589727 MSH5O43196 834 aa19.42■□□□□ 0.7
ATP6V0A1-222ENST00000589727 POTEDQ86YR6 584 aa18.46■□□□□ 0.55
ATP6V0A1-222ENST00000589727 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
ATP6V0A1-222ENST00000589727 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
ATP6V0A1-222ENST00000589727 PPP4R3CPQ6ZMV5 832 aa17.87■□□□□ 0.45
ATP6V0A1-222ENST00000589727 DMRT2Q9Y5R5 561 aa17.81■□□□□ 0.44
ATP6V0A1-222ENST00000589727 NISCHQ9Y2I1 1504 aa17.8■□□□□ 0.44
ATP6V0A1-222ENST00000589727 CNKSR2Q8WXI2 1034 aa17.46■□□□□ 0.39
ATP6V0A1-222ENST00000589727 ABCC9O60706 1549 aa17.42■□□□□ 0.38
ATP6V0A1-222ENST00000589727 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
ATP6V0A1-222ENST00000589727 HOXD11P31277 338 aaPredicted RBP17.27■□□□□ 0.36
ATP6V0A1-222ENST00000589727 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
ATP6V0A1-222ENST00000589727 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
ATP6V0A1-222ENST00000589727 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
ATP6V0A1-222ENST00000589727 NPM3O75607 178 aaKnown RBP17■□□□□ 0.31
ATP6V0A1-222ENST00000589727 KCNA4P22459 653 aa16.93■□□□□ 0.3
ATP6V0A1-222ENST00000589727 DNAJC5Q9H3Z4 198 aa16.61■□□□□ 0.25
ATP6V0A1-222ENST00000589727 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
ATP6V0A1-222ENST00000589727 CACNB1Q02641 598 aaPredicted RBP16.51■□□□□ 0.23
ATP6V0A1-222ENST00000589727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.49■□□□□ 0.236e-7■■■□□ 16.6
ATP6V0A1-222ENST00000589727 C1QBPQ07021 282 aaKnown RBP16.37■□□□□ 0.21
ATP6V0A1-222ENST00000589727 CCDC180Q9P1Z9 1646 aa16.31■□□□□ 0.2
ATP6V0A1-222ENST00000589727 SLC4A2P04920 1241 aa16.16■□□□□ 0.18
ATP6V0A1-222ENST00000589727 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
ATP6V0A1-222ENST00000589727 PABPN1Q86U42 306 aaKnown RBP eCLIP16.12■□□□□ 0.17
ATP6V0A1-222ENST00000589727 RB1CC1Q8TDY2 1594 aa16.09■□□□□ 0.17
ATP6V0A1-222ENST00000589727 SLC4A1APQ9BWU0 796 aaKnown RBP16.06■□□□□ 0.16
ATP6V0A1-222ENST00000589727 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
ATP6V0A1-222ENST00000589727 CAPN15O75808 1086 aa15.82■□□□□ 0.12
ATP6V0A1-222ENST00000589727 CECR2Q9BXF3 1484 aa15.81■□□□□ 0.12
ATP6V0A1-222ENST00000589727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.8■□□□□ 0.12
ATP6V0A1-222ENST00000589727 HNRNPUL2Q1KMD3 747 aaKnown RBP15.8■□□□□ 0.12
ATP6V0A1-222ENST00000589727 APLP2Q06481 763 aa15.75■□□□□ 0.11
ATP6V0A1-222ENST00000589727 NACADO15069 1562 aa15.74■□□□□ 0.11
ATP6V0A1-222ENST00000589727 MYCNP04198 464 aaPredicted RBP15.73■□□□□ 0.11
ATP6V0A1-222ENST00000589727 SAMD1Q6SPF0 538 aaPredicted RBP15.72■□□□□ 0.11
ATP6V0A1-222ENST00000589727 FOXD4L1Q9NU39 408 aa15.71■□□□□ 0.11
ATP6V0A1-222ENST00000589727 TRHP20396 242 aaPredicted RBP15.64■□□□□ 0.09
ATP6V0A1-222ENST00000589727 DSG3P32926 999 aa15.63■□□□□ 0.09
ATP6V0A1-222ENST00000589727 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
ATP6V0A1-222ENST00000589727 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
ATP6V0A1-222ENST00000589727 DCAF8L2P0C7V8 631 aa15.6■□□□□ 0.09
ATP6V0A1-222ENST00000589727 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
ATP6V0A1-222ENST00000589727 ZBTB22O15209 634 aa15.56■□□□□ 0.08
ATP6V0A1-222ENST00000589727 UNC13AQ9UPW8 1703 aa15.56■□□□□ 0.08
ATP6V0A1-222ENST00000589727 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
ATP6V0A1-222ENST00000589727 ABCB7O75027 752 aa15.47■□□□□ 0.07
ATP6V0A1-222ENST00000589727 CUX2O14529 1486 aa15.41■□□□□ 0.06
ATP6V0A1-222ENST00000589727 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
ATP6V0A1-222ENST00000589727 SHROOM4Q9ULL8 1493 aa15.35■□□□□ 0.05
ATP6V0A1-222ENST00000589727 ATF5Q9Y2D1 282 aaPredicted RBP15.33■□□□□ 0.04
ATP6V0A1-222ENST00000589727 POLA2Q14181 598 aa15.28■□□□□ 0.04
ATP6V0A1-222ENST00000589727 ATXN8OSP0DMR3 200 aa15.2■□□□□ 0.02
ATP6V0A1-222ENST00000589727 MYO15BQ96JP2 1530 aa15.19■□□□□ 0.02
ATP6V0A1-222ENST00000589727 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
ATP6V0A1-222ENST00000589727 CSRNP3Q8WYN3 585 aa15.11■□□□□ 0.01
ATP6V0A1-222ENST00000589727 EHMT2Q96KQ7 1210 aa15.1■□□□□ 0.01
ATP6V0A1-222ENST00000589727 ZBTB12Q9Y330 459 aaPredicted RBP14.98□□□□□ -0.01
ATP6V0A1-222ENST00000589727 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
ATP6V0A1-222ENST00000589727 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
ATP6V0A1-222ENST00000589727 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
ATP6V0A1-222ENST00000589727 FBLN2P98095 1184 aa14.74□□□□□ -0.05
ATP6V0A1-222ENST00000589727 NESP48681 1621 aa14.66□□□□□ -0.06
ATP6V0A1-222ENST00000589727 MKRN4PQ13434 485 aaPredicted RBP14.64□□□□□ -0.07
ATP6V0A1-222ENST00000589727 THOC2Q8NI27 1593 aaKnown RBP14.64□□□□□ -0.07
ATP6V0A1-222ENST00000589727 AKT1S1Q96B36 256 aa14.63□□□□□ -0.07
ATP6V0A1-222ENST00000589727 DCAF1Q9Y4B6 1507 aa14.62□□□□□ -0.07
ATP6V0A1-222ENST00000589727 NCAPD3P42695 1498 aa14.58□□□□□ -0.08
ATP6V0A1-222ENST00000589727 ZCCHC6Q5VYS8 1495 aaKnown RBP14.53□□□□□ -0.08
ATP6V0A1-222ENST00000589727 SPDYE2BA6NHP3 402 aa14.53□□□□□ -0.08
ATP6V0A1-222ENST00000589727 SPDYE6P0CI01 402 aa14.53□□□□□ -0.08
ATP6V0A1-222ENST00000589727 SPDYE2Q495Y8 402 aa14.53□□□□□ -0.08
ATP6V0A1-222ENST00000589727 POTEHQ6S545 545 aa14.53□□□□□ -0.08
ATP6V0A1-222ENST00000589727 SMARCA2P51531 1590 aa14.52□□□□□ -0.08
ATP6V0A1-222ENST00000589727 REM2Q8IYK8 340 aaPredicted RBP14.5□□□□□ -0.09
ATP6V0A1-222ENST00000589727 BAZ1AQ9NRL2 1556 aaPredicted RBP14.48□□□□□ -0.09
ATP6V0A1-222ENST00000589727 CHRDL2Q6WN34 429 aa14.48□□□□□ -0.09
ATP6V0A1-222ENST00000589727 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
ATP6V0A1-222ENST00000589727 RIMBP3CA6NJZ7 1639 aa14.41□□□□□ -0.1
ATP6V0A1-222ENST00000589727 RIMBP3BA6NNM3 1639 aa14.41□□□□□ -0.1
ATP6V0A1-222ENST00000589727 RIMBP3Q9UFD9 1639 aa14.41□□□□□ -0.1
ATP6V0A1-222ENST00000589727 ILDR1Q86SU0 546 aaPredicted RBP14.4□□□□□ -0.1
ATP6V0A1-222ENST00000589727 PDS5BQ9NTI5 1447 aa14.4□□□□□ -0.1
ATP6V0A1-222ENST00000589727 ATAD2BQ9ULI0 1458 aa14.39□□□□□ -0.11
ATP6V0A1-222ENST00000589727 LAMC3Q9Y6N6 1575 aa14.36□□□□□ -0.11
ATP6V0A1-222ENST00000589727 CYB5RLQ6IPT4 315 aa14.36□□□□□ -0.11
ATP6V0A1-222ENST00000589727 SSUH2Q9Y2M2 353 aa14.35□□□□□ -0.11
ATP6V0A1-222ENST00000589727 HMGXB3Q12766 1538 aa14.33□□□□□ -0.12
ATP6V0A1-222ENST00000589727 PITPNM1O00562 1244 aa14.33□□□□□ -0.12
ATP6V0A1-222ENST00000589727 KIF21AQ7Z4S6 1674 aa14.33□□□□□ -0.12
ATP6V0A1-222ENST00000589727 ARHGEF11O15085 1522 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms