Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL20P78556 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.69■□□□□ 0.1
CCL20P78556 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CCL20P78556 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL20P78556 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL20P78556 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL20P78556 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL20P78556 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCL20P78556 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL20P78556 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL20P78556 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.69■□□□□ 0.1
CCL20P78556 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.69■□□□□ 0.1
CCL20P78556 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.69■□□□□ 0.1
CCL20P78556 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL20P78556 AP004607.4-201ENST00000530158 1459 ntBASIC15.69■□□□□ 0.1
CCL20P78556 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL20P78556 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL20P78556 AC061975.6-201ENST00000579045 1553 ntBASIC15.69■□□□□ 0.1
CCL20P78556 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL20P78556 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL20P78556 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL20P78556 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL20P78556 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL20P78556 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL20P78556 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL20P78556 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL20P78556 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.68■□□□□ 0.1
CCL20P78556 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL20P78556 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.68■□□□□ 0.1
CCL20P78556 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CCL20P78556 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.68■□□□□ 0.1
CCL20P78556 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.68■□□□□ 0.1
CCL20P78556 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCL20P78556 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.68■□□□□ 0.1
CCL20P78556 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.68■□□□□ 0.1
CCL20P78556 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.68■□□□□ 0.1
CCL20P78556 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCL20P78556 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL20P78556 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL20P78556 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.67■□□□□ 0.1
CCL20P78556 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CCL20P78556 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL20P78556 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCL20P78556 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL20P78556 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.67■□□□□ 0.1
CCL20P78556 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCL20P78556 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL20P78556 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL20P78556 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.67■□□□□ 0.1
CCL20P78556 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL20P78556 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCL20P78556 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCL20P78556 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCL20P78556 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL20P78556 SYT6-210ENST00000641643 1587 ntBASIC15.66■□□□□ 0.1
CCL20P78556 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
CCL20P78556 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL20P78556 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL20P78556 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL20P78556 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL20P78556 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCL20P78556 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL20P78556 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCL20P78556 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCL20P78556 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL20P78556 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL20P78556 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL20P78556 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms