Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.12■□□□□ 0.33
UBA52P62987 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.12■□□□□ 0.33
UBA52P62987 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
UBA52P62987 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.12■□□□□ 0.33
UBA52P62987 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBA52P62987 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBA52P62987 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBA52P62987 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
UBA52P62987 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBA52P62987 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.11■□□□□ 0.33
UBA52P62987 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
UBA52P62987 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.11■□□□□ 0.33
UBA52P62987 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 AL162377.1-201ENST00000618844 1793 ntBASIC17.11■□□□□ 0.33
UBA52P62987 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.11■□□□□ 0.33
UBA52P62987 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBA52P62987 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.11■□□□□ 0.33
UBA52P62987 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBA52P62987 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.11■□□□□ 0.33
UBA52P62987 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.11■□□□□ 0.33
UBA52P62987 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBA52P62987 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.1■□□□□ 0.33
UBA52P62987 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
UBA52P62987 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.1■□□□□ 0.33
UBA52P62987 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.1■□□□□ 0.33
UBA52P62987 AC079089.2-201ENST00000531211 1277 ntBASIC17.1■□□□□ 0.33
UBA52P62987 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.1■□□□□ 0.33
UBA52P62987 AC098934.4-201ENST00000564127 592 ntBASIC17.1■□□□□ 0.33
UBA52P62987 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.1■□□□□ 0.33
UBA52P62987 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.1■□□□□ 0.33
UBA52P62987 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
UBA52P62987 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBA52P62987 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
UBA52P62987 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.09■□□□□ 0.33
UBA52P62987 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.09■□□□□ 0.33
UBA52P62987 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.09■□□□□ 0.33
UBA52P62987 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.09■□□□□ 0.33
UBA52P62987 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.09■□□□□ 0.33
UBA52P62987 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.09■□□□□ 0.33
UBA52P62987 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
UBA52P62987 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.09■□□□□ 0.33
UBA52P62987 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.09■□□□□ 0.33
UBA52P62987 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.09■□□□□ 0.33
UBA52P62987 AC013268.1-206ENST00000638368 961 ntBASIC17.09■□□□□ 0.33
UBA52P62987 AC112229.1-201ENST00000639295 961 ntBASIC17.09■□□□□ 0.33
UBA52P62987 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 PLK5-205ENST00000642079 1969 ntBASIC17.09■□□□□ 0.33
UBA52P62987 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.09■□□□□ 0.33
UBA52P62987 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.09■□□□□ 0.33
UBA52P62987 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBA52P62987 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.08■□□□□ 0.33
UBA52P62987 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBA52P62987 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
UBA52P62987 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBA52P62987 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBA52P62987 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
UBA52P62987 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms