Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.16■□□□□ 0.5
CXCR4P61073 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CXCR4P61073 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CXCR4P61073 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CXCR4P61073 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CXCR4P61073 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CXCR4P61073 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.16■□□□□ 0.5
CXCR4P61073 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.15■□□□□ 0.5
CXCR4P61073 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.15■□□□□ 0.5
CXCR4P61073 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.15■□□□□ 0.5
CXCR4P61073 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.15■□□□□ 0.5
CXCR4P61073 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CXCR4P61073 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.14■□□□□ 0.5
CXCR4P61073 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CXCR4P61073 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
CXCR4P61073 KRT87P-202ENST00000534226 1464 ntBASIC18.14■□□□□ 0.5
CXCR4P61073 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CXCR4P61073 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
CXCR4P61073 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CXCR4P61073 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.14■□□□□ 0.49
CXCR4P61073 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CXCR4P61073 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.14■□□□□ 0.49
CXCR4P61073 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.14■□□□□ 0.49
CXCR4P61073 AC079140.4-201ENST00000507448 529 ntBASIC18.14■□□□□ 0.49
CXCR4P61073 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.14■□□□□ 0.49
CXCR4P61073 AL031432.3-201ENST00000607698 485 ntBASIC18.14■□□□□ 0.49
CXCR4P61073 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.14■□□□□ 0.49
CXCR4P61073 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CXCR4P61073 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CXCR4P61073 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CXCR4P61073 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CXCR4P61073 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.14■□□□□ 0.49
CXCR4P61073 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CXCR4P61073 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CXCR4P61073 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CXCR4P61073 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CXCR4P61073 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.14■□□□□ 0.49
CXCR4P61073 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CXCR4P61073 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CXCR4P61073 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CXCR4P61073 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CXCR4P61073 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.13■□□□□ 0.49
CXCR4P61073 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.13■□□□□ 0.49
CXCR4P61073 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CXCR4P61073 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.13■□□□□ 0.49
CXCR4P61073 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.13■□□□□ 0.49
CXCR4P61073 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CXCR4P61073 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CXCR4P61073 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CXCR4P61073 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CXCR4P61073 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.13■□□□□ 0.49
CXCR4P61073 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CXCR4P61073 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.13■□□□□ 0.49
CXCR4P61073 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CXCR4P61073 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CXCR4P61073 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.13■□□□□ 0.49
CXCR4P61073 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CXCR4P61073 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CXCR4P61073 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CXCR4P61073 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CXCR4P61073 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CXCR4P61073 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CXCR4P61073 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
CXCR4P61073 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CXCR4P61073 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.13■□□□□ 0.49
CXCR4P61073 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CXCR4P61073 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CXCR4P61073 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CXCR4P61073 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.12■□□□□ 0.49
CXCR4P61073 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CXCR4P61073 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CXCR4P61073 CROCCP3-202ENST00000420820 1947 ntBASIC18.12■□□□□ 0.49
CXCR4P61073 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.12■□□□□ 0.49
CXCR4P61073 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CXCR4P61073 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.12■□□□□ 0.49
CXCR4P61073 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CXCR4P61073 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CXCR4P61073 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms