Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHA4P54764 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.24■□□□□ 0.67
EPHA4P54764 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA4P54764 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHA4P54764 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA4P54764 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA4P54764 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
EPHA4P54764 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHA4P54764 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
EPHA4P54764 KRT17P2-201ENST00000300992 1314 ntBASIC19.24■□□□□ 0.67
EPHA4P54764 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHA4P54764 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA4P54764 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA4P54764 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
EPHA4P54764 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.23■□□□□ 0.67
EPHA4P54764 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.23■□□□□ 0.67
EPHA4P54764 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA4P54764 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.23■□□□□ 0.67
EPHA4P54764 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.23■□□□□ 0.67
EPHA4P54764 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.23■□□□□ 0.67
EPHA4P54764 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA4P54764 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA4P54764 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHA4P54764 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
EPHA4P54764 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA4P54764 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA4P54764 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHA4P54764 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA4P54764 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
EPHA4P54764 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHA4P54764 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHA4P54764 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA4P54764 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA4P54764 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.22■□□□□ 0.67
EPHA4P54764 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.22■□□□□ 0.67
EPHA4P54764 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.22■□□□□ 0.67
EPHA4P54764 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA4P54764 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA4P54764 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA4P54764 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA4P54764 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.22■□□□□ 0.67
EPHA4P54764 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.22■□□□□ 0.67
EPHA4P54764 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
EPHA4P54764 KRT16P6-202ENST00000425692 1426 ntBASIC19.22■□□□□ 0.67
EPHA4P54764 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
EPHA4P54764 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA4P54764 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA4P54764 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA4P54764 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHA4P54764 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.22■□□□□ 0.67
EPHA4P54764 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA4P54764 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA4P54764 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
EPHA4P54764 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.21■□□□□ 0.67
EPHA4P54764 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
EPHA4P54764 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA4P54764 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA4P54764 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA4P54764 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.21■□□□□ 0.67
EPHA4P54764 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.21■□□□□ 0.67
EPHA4P54764 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.21■□□□□ 0.67
EPHA4P54764 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.21■□□□□ 0.67
EPHA4P54764 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA4P54764 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.21■□□□□ 0.67
EPHA4P54764 MIR4785-201ENST00000585005 73 ntBASIC19.21■□□□□ 0.67
EPHA4P54764 AC113410.3-201ENST00000623366 203 ntBASIC19.21■□□□□ 0.67
EPHA4P54764 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.21■□□□□ 0.67
EPHA4P54764 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA4P54764 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA4P54764 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.21■□□□□ 0.67
EPHA4P54764 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA4P54764 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA4P54764 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.21■□□□□ 0.67
EPHA4P54764 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA4P54764 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.2■□□□□ 0.66
EPHA4P54764 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHA4P54764 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHA4P54764 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EPHA4P54764 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EPHA4P54764 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.2■□□□□ 0.66
EPHA4P54764 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EPHA4P54764 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
EPHA4P54764 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.2■□□□□ 0.66
EPHA4P54764 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EPHA4P54764 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
EPHA4P54764 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.2■□□□□ 0.66
EPHA4P54764 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHA4P54764 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.2■□□□□ 0.66
EPHA4P54764 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
EPHA4P54764 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.2■□□□□ 0.66
EPHA4P54764 HTR7P1-201ENST00000538670 1336 ntBASIC19.2■□□□□ 0.66
EPHA4P54764 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EPHA4P54764 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
EPHA4P54764 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.2■□□□□ 0.66
EPHA4P54764 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA4P54764 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.19■□□□□ 0.66
EPHA4P54764 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA4P54764 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
EPHA4P54764 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA4P54764 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms