Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.09■□□□□ 0.81
LIMK2P53671 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LIMK2P53671 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.09■□□□□ 0.81
LIMK2P53671 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.09■□□□□ 0.81
LIMK2P53671 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LIMK2P53671 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.09■□□□□ 0.81
LIMK2P53671 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LIMK2P53671 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LIMK2P53671 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.09■□□□□ 0.81
LIMK2P53671 AC097658.1-201ENST00000475555 843 ntBASIC20.09■□□□□ 0.81
LIMK2P53671 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.09■□□□□ 0.81
LIMK2P53671 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LIMK2P53671 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.09■□□□□ 0.81
LIMK2P53671 AL356652.1-201ENST00000615962 565 ntBASIC20.09■□□□□ 0.81
LIMK2P53671 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LIMK2P53671 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LIMK2P53671 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LIMK2P53671 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LIMK2P53671 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.09■□□□□ 0.81
LIMK2P53671 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
LIMK2P53671 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LIMK2P53671 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LIMK2P53671 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LIMK2P53671 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LIMK2P53671 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LIMK2P53671 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
LIMK2P53671 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LIMK2P53671 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LIMK2P53671 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LIMK2P53671 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LIMK2P53671 POU5F1P3-201ENST00000428824 1078 ntBASIC20.08■□□□□ 0.81
LIMK2P53671 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.08■□□□□ 0.81
LIMK2P53671 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.08■□□□□ 0.81
LIMK2P53671 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.08■□□□□ 0.81
LIMK2P53671 MYC-209ENST00000641252 345 ntBASIC20.08■□□□□ 0.81
LIMK2P53671 TMEM179-206ENST00000616017 1645 ntBASIC20.08■□□□□ 0.8
LIMK2P53671 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LIMK2P53671 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LIMK2P53671 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LIMK2P53671 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.08■□□□□ 0.8
LIMK2P53671 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.08■□□□□ 0.8
LIMK2P53671 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
LIMK2P53671 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LIMK2P53671 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LIMK2P53671 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
LIMK2P53671 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK2P53671 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK2P53671 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.07■□□□□ 0.8
LIMK2P53671 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK2P53671 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK2P53671 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
LIMK2P53671 CYP21A1P-202ENST00000354927 1481 ntBASIC20.07■□□□□ 0.8
LIMK2P53671 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK2P53671 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK2P53671 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.07■□□□□ 0.8
LIMK2P53671 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.07■□□□□ 0.8
LIMK2P53671 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.07■□□□□ 0.8
LIMK2P53671 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.07■□□□□ 0.8
LIMK2P53671 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK2P53671 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.07■□□□□ 0.8
LIMK2P53671 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
LIMK2P53671 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LIMK2P53671 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.07■□□□□ 0.8
LIMK2P53671 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.07■□□□□ 0.8
LIMK2P53671 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK2P53671 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK2P53671 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK2P53671 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LIMK2P53671 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LIMK2P53671 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK2P53671 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK2P53671 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK2P53671 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK2P53671 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK2P53671 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
LIMK2P53671 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.06■□□□□ 0.8
LIMK2P53671 AC091874.3-201ENST00000512672 1195 ntBASIC20.06■□□□□ 0.8
LIMK2P53671 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.06■□□□□ 0.8
LIMK2P53671 AC083880.1-201ENST00000608266 535 ntBASIC20.06■□□□□ 0.8
LIMK2P53671 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK2P53671 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK2P53671 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LIMK2P53671 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LIMK2P53671 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LIMK2P53671 AL158211.5-201ENST00000623583 2518 ntBASIC20.06■□□□□ 0.8
LIMK2P53671 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.05■□□□□ 0.8
LIMK2P53671 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.05■□□□□ 0.8
LIMK2P53671 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK2P53671 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.05■□□□□ 0.8
LIMK2P53671 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK2P53671 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK2P53671 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LIMK2P53671 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.05■□□□□ 0.8
LIMK2P53671 AC066615.1-201ENST00000640911 628 ntBASIC20.05■□□□□ 0.8
LIMK2P53671 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK2P53671 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
LIMK2P53671 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LIMK2P53671 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
LIMK2P53671 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
LIMK2P53671 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms