Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCN2P51788 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CLCN2P51788 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCN2P51788 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCN2P51788 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCN2P51788 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN2P51788 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCN2P51788 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCN2P51788 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CLCN2P51788 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLCN2P51788 AL355802.2-201ENST00000402069 882 ntBASIC19.25■□□□□ 0.67
CLCN2P51788 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.25■□□□□ 0.67
CLCN2P51788 RARRES2P4-201ENST00000514074 484 ntBASIC19.25■□□□□ 0.67
CLCN2P51788 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CLCN2P51788 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCN2P51788 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCN2P51788 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 TCF3P1-201ENST00000423021 1937 ntBASIC19.25■□□□□ 0.67
CLCN2P51788 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CLCN2P51788 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN2P51788 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN2P51788 AC020916.1-201ENST00000587762 1774 ntBASIC19.24■□□□□ 0.67
CLCN2P51788 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLCN2P51788 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCN2P51788 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCN2P51788 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLCN2P51788 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN2P51788 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CLCN2P51788 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN2P51788 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCN2P51788 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.24■□□□□ 0.67
CLCN2P51788 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLCN2P51788 AC016405.3-201ENST00000607710 860 ntBASIC19.24■□□□□ 0.67
CLCN2P51788 FAM21FP-204ENST00000608637 956 ntBASIC19.24■□□□□ 0.67
CLCN2P51788 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN2P51788 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLCN2P51788 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.24■□□□□ 0.67
CLCN2P51788 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCN2P51788 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN2P51788 MKRN4P-201ENST00000444706 1521 ntBASIC19.24■□□□□ 0.67
CLCN2P51788 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN2P51788 FP700111.2-201ENST00000619190 1892 ntBASIC19.24■□□□□ 0.67
CLCN2P51788 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN2P51788 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCN2P51788 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN2P51788 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN2P51788 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCN2P51788 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN2P51788 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLCN2P51788 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.23■□□□□ 0.67
CLCN2P51788 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CLCN2P51788 AC007322.3-201ENST00000426526 701 ntBASIC19.23■□□□□ 0.67
CLCN2P51788 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.23■□□□□ 0.67
CLCN2P51788 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN2P51788 AC005082.1-201ENST00000413042 2259 ntBASIC19.23■□□□□ 0.67
CLCN2P51788 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLCN2P51788 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN2P51788 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN2P51788 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLCN2P51788 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CLCN2P51788 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.23■□□□□ 0.67
CLCN2P51788 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.23■□□□□ 0.67
CLCN2P51788 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.23■□□□□ 0.67
CLCN2P51788 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN2P51788 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN2P51788 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLCN2P51788 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLCN2P51788 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN2P51788 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN2P51788 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN2P51788 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN2P51788 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN2P51788 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN2P51788 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN2P51788 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLCN2P51788 GUSBP6-202ENST00000438529 1198 ntBASIC19.22■□□□□ 0.67
CLCN2P51788 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.22■□□□□ 0.67
CLCN2P51788 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CLCN2P51788 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.22■□□□□ 0.67
CLCN2P51788 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN2P51788 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCN2P51788 AC079598.2-202ENST00000546624 1451 ntBASIC19.22■□□□□ 0.67
CLCN2P51788 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN2P51788 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCN2P51788 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCN2P51788 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms