Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCK1P16333 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.82■□□□□ 0.6
NCK1P16333 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
NCK1P16333 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.82■□□□□ 0.6
NCK1P16333 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCK1P16333 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCK1P16333 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.82■□□□□ 0.6
NCK1P16333 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCK1P16333 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.82■□□□□ 0.6
NCK1P16333 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.81■□□□□ 0.6
NCK1P16333 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCK1P16333 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCK1P16333 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCK1P16333 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NCK1P16333 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCK1P16333 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NCK1P16333 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCK1P16333 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCK1P16333 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCK1P16333 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCK1P16333 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCK1P16333 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.81■□□□□ 0.6
NCK1P16333 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCK1P16333 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.81■□□□□ 0.6
NCK1P16333 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.81■□□□□ 0.6
NCK1P16333 NEFHP1-201ENST00000412845 2629 ntBASIC18.81■□□□□ 0.6
NCK1P16333 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.81■□□□□ 0.6
NCK1P16333 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NCK1P16333 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCK1P16333 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCK1P16333 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCK1P16333 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.8■□□□□ 0.6
NCK1P16333 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NCK1P16333 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NCK1P16333 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NCK1P16333 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.8■□□□□ 0.6
NCK1P16333 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.8■□□□□ 0.6
NCK1P16333 FAM21FP-204ENST00000608637 956 ntBASIC18.8■□□□□ 0.6
NCK1P16333 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.8■□□□□ 0.6
NCK1P16333 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCK1P16333 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NCK1P16333 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NCK1P16333 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCK1P16333 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCK1P16333 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NCK1P16333 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCK1P16333 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCK1P16333 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCK1P16333 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.79■□□□□ 0.6
NCK1P16333 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NCK1P16333 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCK1P16333 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.79■□□□□ 0.6
NCK1P16333 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.79■□□□□ 0.6
NCK1P16333 RBM17P2-201ENST00000616397 1405 ntBASIC18.79■□□□□ 0.6
NCK1P16333 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCK1P16333 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCK1P16333 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.79■□□□□ 0.6
NCK1P16333 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCK1P16333 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.79■□□□□ 0.6
NCK1P16333 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCK1P16333 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCK1P16333 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCK1P16333 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.79■□□□□ 0.6
NCK1P16333 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NCK1P16333 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCK1P16333 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCK1P16333 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCK1P16333 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCK1P16333 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
NCK1P16333 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.78■□□□□ 0.6
NCK1P16333 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCK1P16333 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCK1P16333 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCK1P16333 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCK1P16333 AC105265.2-201ENST00000467189 838 ntBASIC18.78■□□□□ 0.6
NCK1P16333 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.78■□□□□ 0.6
NCK1P16333 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NCK1P16333 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.78■□□□□ 0.6
NCK1P16333 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCK1P16333 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.78■□□□□ 0.6
NCK1P16333 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCK1P16333 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCK1P16333 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NCK1P16333 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NCK1P16333 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms