Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP1A1P05023 KRT18P61-201ENST00000585825 1298 ntBASIC21.2■□□□□ 0.98
ATP1A1P05023 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.2■□□□□ 0.98
ATP1A1P05023 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.2■□□□□ 0.98
ATP1A1P05023 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP1A1P05023 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ATP1A1P05023 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP1A1P05023 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP1A1P05023 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP1A1P05023 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP1A1P05023 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP1A1P05023 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP1A1P05023 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP1A1P05023 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP1A1P05023 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP1A1P05023 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP1A1P05023 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP1A1P05023 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP1A1P05023 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP1A1P05023 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP1A1P05023 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP1A1P05023 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP1A1P05023 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 AC007322.3-201ENST00000426526 701 ntBASIC21.18■□□□□ 0.98
ATP1A1P05023 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.18■□□□□ 0.98
ATP1A1P05023 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP1A1P05023 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP1A1P05023 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP1A1P05023 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP1A1P05023 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 AC004854.2-201ENST00000608450 1441 ntBASIC21.18■□□□□ 0.98
ATP1A1P05023 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 NEFHP1-201ENST00000412845 2629 ntBASIC21.18■□□□□ 0.98
ATP1A1P05023 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP1A1P05023 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP1A1P05023 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP1A1P05023 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1A1P05023 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ATP1A1P05023 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP1A1P05023 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.17■□□□□ 0.98
ATP1A1P05023 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.17■□□□□ 0.98
ATP1A1P05023 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP1A1P05023 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP1A1P05023 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP1A1P05023 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP1A1P05023 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP1A1P05023 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP1A1P05023 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP1A1P05023 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP1A1P05023 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP1A1P05023 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP1A1P05023 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP1A1P05023 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP1A1P05023 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP1A1P05023 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP1A1P05023 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
ATP1A1P05023 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ATP1A1P05023 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP1A1P05023 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ATP1A1P05023 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP1A1P05023 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP1A1P05023 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP1A1P05023 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP1A1P05023 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP1A1P05023 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.16■□□□□ 0.98
ATP1A1P05023 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.16■□□□□ 0.98
ATP1A1P05023 AC104187.1-201ENST00000607510 612 ntBASIC21.16■□□□□ 0.98
ATP1A1P05023 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP1A1P05023 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP1A1P05023 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ATP1A1P05023 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP1A1P05023 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP1A1P05023 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP1A1P05023 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP1A1P05023 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP1A1P05023 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
ATP1A1P05023 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP1A1P05023 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP1A1P05023 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP1A1P05023 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP1A1P05023 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP1A1P05023 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ATP1A1P05023 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP1A1P05023 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.15■□□□□ 0.98
ATP1A1P05023 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP1A1P05023 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.15■□□□□ 0.98
ATP1A1P05023 AC022517.1-201ENST00000592429 346 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms