Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.66■□□□□ 0.26
GAPDHP04406 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
GAPDHP04406 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GAPDHP04406 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.65■□□□□ 0.26
GAPDHP04406 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GAPDHP04406 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.65■□□□□ 0.26
GAPDHP04406 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GAPDHP04406 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GAPDHP04406 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.65■□□□□ 0.26
GAPDHP04406 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.65■□□□□ 0.26
GAPDHP04406 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GAPDHP04406 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GAPDHP04406 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GAPDHP04406 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.65■□□□□ 0.26
GAPDHP04406 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GAPDHP04406 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.65■□□□□ 0.26
GAPDHP04406 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GAPDHP04406 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GAPDHP04406 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GAPDHP04406 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.65■□□□□ 0.26
GAPDHP04406 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.65■□□□□ 0.26
GAPDHP04406 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GAPDHP04406 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
GAPDHP04406 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GAPDHP04406 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
GAPDHP04406 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
GAPDHP04406 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.64■□□□□ 0.26
GAPDHP04406 AC026471.1-201ENST00000564629 3026 ntBASIC16.64■□□□□ 0.26
GAPDHP04406 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.64■□□□□ 0.25
GAPDHP04406 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.64■□□□□ 0.25
GAPDHP04406 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.64■□□□□ 0.25
GAPDHP04406 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
GAPDHP04406 AC007322.1-201ENST00000426983 750 ntBASIC16.64■□□□□ 0.25
GAPDHP04406 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GAPDHP04406 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.64■□□□□ 0.25
GAPDHP04406 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.64■□□□□ 0.25
GAPDHP04406 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.64■□□□□ 0.25
GAPDHP04406 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.64■□□□□ 0.25
GAPDHP04406 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GAPDHP04406 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GAPDHP04406 AC125437.2-201ENST00000625180 2167 ntBASIC16.64■□□□□ 0.25
GAPDHP04406 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.64■□□□□ 0.25
GAPDHP04406 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.63■□□□□ 0.25
GAPDHP04406 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
GAPDHP04406 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GAPDHP04406 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.63■□□□□ 0.25
GAPDHP04406 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.63■□□□□ 0.25
GAPDHP04406 FAM21FP-204ENST00000608637 956 ntBASIC16.63■□□□□ 0.25
GAPDHP04406 IKBKGP1-201ENST00000612193 1073 ntBASIC16.63■□□□□ 0.25
GAPDHP04406 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.63■□□□□ 0.25
GAPDHP04406 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
GAPDHP04406 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GAPDHP04406 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GAPDHP04406 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GAPDHP04406 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GAPDHP04406 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GAPDHP04406 AL158211.5-201ENST00000623583 2518 ntBASIC16.62■□□□□ 0.25
GAPDHP04406 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
GAPDHP04406 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
GAPDHP04406 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
GAPDHP04406 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.62■□□□□ 0.25
GAPDHP04406 AC004911.1-201ENST00000416316 871 ntBASIC16.62■□□□□ 0.25
GAPDHP04406 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.62■□□□□ 0.25
GAPDHP04406 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GAPDHP04406 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
GAPDHP04406 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.62■□□□□ 0.25
GAPDHP04406 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.62■□□□□ 0.25
GAPDHP04406 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.62■□□□□ 0.25
GAPDHP04406 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
GAPDHP04406 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GAPDHP04406 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.62■□□□□ 0.25
GAPDHP04406 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 661.5 ms